Gene BBta_1359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1359 
Symbol 
ID5156028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1444464 
End bp1445468 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content66% 
IMG OID640556340 
ProductSPFH domain-containing protein/band 7 family protein 
Protein accessionYP_001237499 
Protein GI148252914 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0198882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTT TCGACATTTT CGCCATAGCG CTGGTGCTGC TGGCCATCTT CACTCTCTAT 
TCCGGCGTGA AGACCGTGCC GCAGGGGTTC GACTGGACCG TCGAGCGGTT CGGCAAATAC
ACCCGCACCC TGTCGCCGGG CCTCAACATC ATCGTGCCCT ATTTTGATCG CATCGGGCGC
AAGATCAACA TGATGGAGCA GGTGATCGAC ATCCCGGAGC AGGAGGTCAT CACCAAGGAC
AATGCCACGG TGACGGTCGA CGGCGTCGCC TTCTACCAGG TGTTCGACGC GGCGAAAGCG
AGCTACGAGG TCGCCAACCT CAACCAGGCC ATCATCACGC TGACCATGAC CAACATCCGC
TCGGTGATGG GCTCGATGGA TCTCGACCAG GTGCTGTCGC ATCGCGACGA GATCAATGAG
CGGCTGCTGC GCGTCGTCGA CGCCGCGGTG TCGCCGTGGG GGCTCAAGGT CAACCGCATC
GAGATCAAGG ACATCGTGCC GCCGGCCGAT CTCGTCGAGG CGATGGGCCG GCAGATGAAG
GCCGAGCGCG TCAAGCGCGC CGACATCCTG CAGGCCGAGG GCCAGCGTCA GTCCGAGATC
CTGCGCGCGG AAGGTGCCAA GCAGAGCCAG ATCCTGCAGG CGGAAGGCCG CCGCCAGTCG
GCGTTCCTCG ACGCCGAGGC GCGCGAGCGC GCGGCACAGG CCGAGGCCAA GGCGACGCAG
ATGGTGTCGG AAGCGATCTC GAAAGGCGAC GTCGCCGCGC TGAACTACTT CATCGCCGAC
AAATACATCA AGGCGTTCGG CCAGCTCGCC GACTCGCCGA ACCAGAAGGT GATCATGCTG
CCGCTCGAGG CGACGGGCAT GCTGGCCTCG CTCGCCGGCA TCGGCGAGAT CGCCAAGGCG
ACGTTCGGCG AGAGTGCGGC CTCGGCCGTG GCCGCGCGCC GCAGCGGCGG CTCGGTGCCG
TCGGCCGGCA CGCCGCCGAA GCCGCCGGTC CCGCCGCAGG CCTGA
 
Protein sequence
MSGFDIFAIA LVLLAIFTLY SGVKTVPQGF DWTVERFGKY TRTLSPGLNI IVPYFDRIGR 
KINMMEQVID IPEQEVITKD NATVTVDGVA FYQVFDAAKA SYEVANLNQA IITLTMTNIR
SVMGSMDLDQ VLSHRDEINE RLLRVVDAAV SPWGLKVNRI EIKDIVPPAD LVEAMGRQMK
AERVKRADIL QAEGQRQSEI LRAEGAKQSQ ILQAEGRRQS AFLDAEARER AAQAEAKATQ
MVSEAISKGD VAALNYFIAD KYIKAFGQLA DSPNQKVIML PLEATGMLAS LAGIGEIAKA
TFGESAASAV AARRSGGSVP SAGTPPKPPV PPQA