| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1345 |
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| Symbol | hss |
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| ID | 5149002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1429784 |
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| End bp | 1431208 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640556328 |
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| Product | homospermidine synthase |
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| Protein accession | YP_001237487 |
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| Protein GI | 148252902 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5310] Homospermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.284447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCGC AGATCCACGC GAAGATCACC GGCCCCATCG TGATGATCGG CTTCGGCTCG
ATCGGCAAGG GCACCCTGCC CCTGATCGAA CGCCATTTCG AGTACGACAA GAGCCGGTTC
GTCATCATCG ATCCGCATGA CGACGGCGCG CTGGCGAAGC AGCACGGCGT GCGCTTCATC
CAGCAGGGCG TGACGCGCGA CAATTACCGC GAGCTGCTGG TGCCACTGCT GACAGCAGGC
GGCGGCCAGG GCTTCTGCGT CAACCTCTCG GTCGACACCT CCTCGGTCGA CATCATGACC
CTGTGCCGCG AGATCGGCGC GCTCTATATC GACACCGTCG TCGAGCCGTG GGCCGGCTTC
TATTTCGACA AGCAGATGGG CGTCGAGCAG CGCTCCAACT ACGCGCTGCG CGAGACGCTG
CTCGCCGCGC GCCGCAAGAG CCCGGGCGGC ACCACTGCCG TCTCGACCTG CGGCGCCAAT
CCCGGCATGG TGTCCTGGTT CGTCAAGCAG GCGCTGCTCG ATATCGCCAA GGATACCAAG
ACCGAGATCG TCGAGCCGAA GAGCCGCGAG GGCTGGGCGC AGCTGATGCA CAAGCTCGGC
GTCAAGGGCA TCCACATCGC CGAGCGCGAC ACCCAGCGCT CCAAGAACCC GAAGCCGATG
GACGTGTTCG TCAACACCTG GTCGGTCGAG GGCTTCGTCT CCGAGGGCAT GCAGCCGGCC
GAGCTCGGCT GGGGCACGCA TGAAAAGTGG ATGCCGGACA ACGGCCGCTG CCACACCGAG
GGCTGTGGCG CAGCCATCTA TCTGTTGCAG CCGGGCGCCA ACACCCGCGT CCGCTCCTGG
TGCCCGACGC CGGGCGCGCA ATATGGCTTC CTGGTCACCC ACAACGAGTC GATCTCGATC
GCCGACTATT ACACCGTGCG CGACGGCGAC AAGGTGGTGT ACCGGCCGAC CTGCCATTAC
GCCTATCACC CGGCCAATGA CGCGGTGCTG TCGCTGCACG AGATCTTCGG CGCCACCGGC
AAGATGCAGC AGAAGTGGCA CATCCTCGAC GAGAACGAGA TCGTCGACGG CATCGACGAG
CTCGGCGTGC TGCTCTATGG CCATGGCAAG AACGCCTATT GGTACGGCTC GCAGCTGTCG
ATCGAGGAAA CCCGCCGCAT CGCGCCGTAC CAGAACGCGA CCGGCCTGCA GGTGTCGTCA
GCCGTGCTCG CGGGCATGGT GTGGGCGCTG GAAAATCCGA CCGCCGGCAT CGTCGAAGCC
GACGAGATGG ACTTCCGCCG CTGCCTCGAG ATCCAGACGC CCTATCTCGG GCCGGTGAAG
GGCTACTACA CGGACTGGAC CCCGCTGAAC GACCGCCCCG GCCTGTTCCC GGAAGACATC
GACACTTCGG ATCCGTGGCA GTTCCGGAAC ATCCTGGTGC GGTGA
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| Protein sequence | MSSQIHAKIT GPIVMIGFGS IGKGTLPLIE RHFEYDKSRF VIIDPHDDGA LAKQHGVRFI
QQGVTRDNYR ELLVPLLTAG GGQGFCVNLS VDTSSVDIMT LCREIGALYI DTVVEPWAGF
YFDKQMGVEQ RSNYALRETL LAARRKSPGG TTAVSTCGAN PGMVSWFVKQ ALLDIAKDTK
TEIVEPKSRE GWAQLMHKLG VKGIHIAERD TQRSKNPKPM DVFVNTWSVE GFVSEGMQPA
ELGWGTHEKW MPDNGRCHTE GCGAAIYLLQ PGANTRVRSW CPTPGAQYGF LVTHNESISI
ADYYTVRDGD KVVYRPTCHY AYHPANDAVL SLHEIFGATG KMQQKWHILD ENEIVDGIDE
LGVLLYGHGK NAYWYGSQLS IEETRRIAPY QNATGLQVSS AVLAGMVWAL ENPTAGIVEA
DEMDFRRCLE IQTPYLGPVK GYYTDWTPLN DRPGLFPEDI DTSDPWQFRN ILVR
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