Gene BBta_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1330 
Symbol 
ID5151470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1418760 
End bp1419476 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content66% 
IMG OID640556314 
Productputative MgtC-magnesium transport family protein 
Protein accessionYP_001237473 
Protein GI148252888 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.530207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTCC TGAACACCTT TCAGCTCTAT GATTTCTTCG ACACGCTCGT GAGCCTCTTC 
ACCGCCTTCG TGCTGGGCAC GCTGATCGGT GCCGAGCGGC AATTTCGGCA GCGGAGCGCG
GGCCTGCGCA CCAACGTGCT GGTCGCGGTC GGAGCGGCCG CCTTCGTCGA TCTCGGCAAC
CGGCTGACCG GCGCGGACGG CGCGGTCCGG ATCATTGCCT ATGTGGTGTC GGGCATCGGC
TTTCTCGGCG CCGGCACCAT CATGAAGGAG GGCATGAATG TCCGCGGCTT GAACACCGCG
GCGACCTTGT GGGCATCTGC TGCGGTGGGC GCCTGTGCCG GCGCGGATCT GGTCGCGCAG
TCGGTGGCGC TGACGCTGTT CGTGCTGGCA GGCAACACCC TGCTCAGGCC GCTGGTGAAT
GCCATCGACC GCATTCCGCT GAACGCGGCC ACGTCCGAGG CCCAGTACGA GCTTGTCGTC
ACCACCGACA TCCTGCATGT GGCGGAGCTG CGTGAGGCGC TCGACGAGCG GTTGGAAGCC
GCCAAATATC CGGTGCGGGA GACCGAGGTC GCATACCGGT CCGACGACAT CGTGGAGATC
ACCGCCACGC TGGTCCCGCT TGCCGCCGAG ACGGCCGAAC TCGACCGCGT GACGGCTGAG
TTGTCGAGGC TGCCCGGCGT ACGTCATGCG ACCTGGAACG TCAGTGCGCT GGAGTGA
 
Protein sequence
MRFLNTFQLY DFFDTLVSLF TAFVLGTLIG AERQFRQRSA GLRTNVLVAV GAAAFVDLGN 
RLTGADGAVR IIAYVVSGIG FLGAGTIMKE GMNVRGLNTA ATLWASAAVG ACAGADLVAQ
SVALTLFVLA GNTLLRPLVN AIDRIPLNAA TSEAQYELVV TTDILHVAEL REALDERLEA
AKYPVRETEV AYRSDDIVEI TATLVPLAAE TAELDRVTAE LSRLPGVRHA TWNVSALE