Gene BBta_1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1306 
Symbol 
ID5155151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1393640 
End bp1395493 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content66% 
IMG OID640556292 
Producthypothetical protein 
Protein accessionYP_001237451 
Protein GI148252866 
COG category[S] Function unknown 
COG ID[COG5338] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.580555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAACGGG CAGGACGAGA GAGCATCAGT CCCAGTTGCC GCGATCGCCG CGGCGTGCTG 
CCGCGTCCGG ACGAGGCGGT GGCGATCACT GTGTTGTTCG TGCTGCTGGT CGAGTCTGCT
CCGTCGTATG CCCAGAGCCA GGCGCGCGCC TATGCTGATC CCGGCACGAT CGACGGTGGC
CCTGTGGTCG TCGTGCCCAA TCGCAAGCGG CCGCCGGCGC GGCCCGCCAA TGGCAACGGT
CCTGTCGTCA TCCCGCAGAT GATCATCGCT CCTGGCGGCA ACGAGCCGGA GCAGGAGCCG
AAGTCCGCAG CTGCCCAGCC GGACGAGCGC ACGCCGCCGC GACCGAAATC GCCGATCGAT
CCTGCGGCCG GTGCGCTTCC GCAGGCCACG CGCCGCGAGC CGGCGCCGCG CCTCGCCCCG
GTTCGCAACG GCTTCTTCGG CGCGCCCTCC GCCGGCCTTC TGGTTGGAGG CTGCCTGGCG
ACGCCAGGCC GTCTGGTGCC GACCAACGTG CCCAATCGCT GCCTGGACGC ATTGGCCTTC
GCTGTGAGCC CGCCCCCGGC CACCCGCGGC GTGCTGCCAC GAAACCTGCC GCCGATTCCG
CGGCAGGACG CGCAACCGAT TCCGCCGGTT TTGGCGGACA AGCCTCGCAT GAAGCTGCCG
CCGGTGAACA AGGGCAAGCC GCAGGAGCCG CAGCCTCAGC CGCCACCGAT GATGGATGAG
GATCCCTACG AGCCCAAGGG CATTACGGTG GGAAACTTCA TCCTGAAGCC TGCGTTCGAA
ATGTCGTCAG GCTTCGACAG CAATCCGGGC CGCGTGCCCA AAGGAGCGGG CTCCGGCTTC
GTCAGCGTTG CACCGGTCCT GCTCGTGCGT TCGCAGTTCG AGCGCCATCT GCTCAATGCC
GATGTGCGCG TCGGCTATAT CGACTATGCA AAGCTCCGGC AGCTCAGCAG GCCTACCGTC
GACGCCAAGG TGAATGGGCG CTACGACATC ACCGATACGT TTGCGATCAA CGGCGAGGGC
CACGTTGCCG TCGATGCCGA TGATCCCGGT ACGCCGCGCT TCGCCGGGCG GTTCGCCAAG
ATCCCGTTGG CCTCGACCGT CGGCGGCTCG GCCGGCGTGA CCAAGAGGTT CGAGGAGATC
GAAATCTCGA CCAAGGCGGC AATCGATCGC GTCGCGTTCC AGAACGCGCC GCTTATCGAC
GGCCAGATCG TCAGCAATGC CGATCGCAAC TTCGTTCAGT ACGGCTCGCA AAGCCGCGTG
ACCTACAACC TGACGCCGGA GATTCGGCCG TTCGTCGATG TCGCGGTCGA CCGGCGCGTT
CATGACATCG CTGTCGATGC GGAAGGGTTC CGCAGAGATT CGACCGGGAC GGCCGTCGAA
GCCGGCGTGA CGTTCGCCTA TGCCGACAAG CTGACCGGCG ACGTCGCTGT CGGCTATCTC
ACGCGGCGCT ACCAGGATCC GATGCTGAAG CCGGTCAGTG GCTTCATTGC CGATGCGAAC
CTGACCTGGC AATACGCCAA GGAGACGGCG ATCATGTTCG GCGCCAAGTC CCAGGTGGTG
GAGATCACCG AGCCAGGGAT CTCCGGCGTG CTCAAGCGCG ACGTCACCGT CGGCATCGAG
CACCAGTTCG AGCCTTGGCT CGTGGGCACG TTCCTTGCCG GCTATGGCCA GGACGCGTTC
ACCGGGACCA CGCGGGTGGA CAATCGTTAC CTGGTCGAGC TCGGCATGCT CTACAAATTC
TCCCGCCTGC TGCAGTTGAG GGCCAGCGTC CGGCGCGAGG AGACCCGGTC CAACTTCCGG
GAGAACGATC TCTCTGCCAC CGTCGTTCAG GTCGGCGCCA GGGTGCAGTA TTAG
 
Protein sequence
MQRAGRESIS PSCRDRRGVL PRPDEAVAIT VLFVLLVESA PSYAQSQARA YADPGTIDGG 
PVVVVPNRKR PPARPANGNG PVVIPQMIIA PGGNEPEQEP KSAAAQPDER TPPRPKSPID
PAAGALPQAT RREPAPRLAP VRNGFFGAPS AGLLVGGCLA TPGRLVPTNV PNRCLDALAF
AVSPPPATRG VLPRNLPPIP RQDAQPIPPV LADKPRMKLP PVNKGKPQEP QPQPPPMMDE
DPYEPKGITV GNFILKPAFE MSSGFDSNPG RVPKGAGSGF VSVAPVLLVR SQFERHLLNA
DVRVGYIDYA KLRQLSRPTV DAKVNGRYDI TDTFAINGEG HVAVDADDPG TPRFAGRFAK
IPLASTVGGS AGVTKRFEEI EISTKAAIDR VAFQNAPLID GQIVSNADRN FVQYGSQSRV
TYNLTPEIRP FVDVAVDRRV HDIAVDAEGF RRDSTGTAVE AGVTFAYADK LTGDVAVGYL
TRRYQDPMLK PVSGFIADAN LTWQYAKETA IMFGAKSQVV EITEPGISGV LKRDVTVGIE
HQFEPWLVGT FLAGYGQDAF TGTTRVDNRY LVELGMLYKF SRLLQLRASV RREETRSNFR
ENDLSATVVQ VGARVQY