Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1297 |
Symbol | |
ID | 5148958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1378285 |
End bp | 1381443 |
Gene Length | 3159 bp |
Protein Length | 1052 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640556284 |
Product | multidrug ABC transporter |
Protein accession | YP_001237443 |
Protein GI | 148252858 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.777713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGATG GCATGCGTGC GGTCGCGGGC CCGCAGGCCG CGTTGATCGC GTTCGCGATC CGCTTTCGTG GCATCGTGCT GGCGTTGGCC TGCACGATCC TGGGCTACGG ACTGTTCTCA CTCGGCGAGG CCAAATATGG CGTCTTCCCG GAATTCGCCC CGCCGCAGGT CTCGATCCAG ACAGAAGCCC CGGGCCTCAG CCCGGAACAG GTCGAGGTGC TCGTCACCCA GCCGATCGAA ACCTCGATCA ACGGCTTGGC CGGCGTCGAG AGCATGCGCT CCTCGTCGAT CCAGGGGCTC TCGGTTCTTT CGGTCATCTT CCAGCCCGGC ACTGACGTGT TCAGGGCCCG GCAATTGGTG GCGGAGCGCC TGACCGCCAT CGTCAACGGC CTGCCGCAGG GCGTGCGGGC CCCCTCGATG ACCCCGCTCG TTCCGGCCGC CGGCACCGTC CTCGTCATCG GACTGACGTC GGAGCAGCGA TCGTTGATGG ATCTGCGCAC GATCGCCGAC TGGACCGTGA GTCGTCGCCT GCTCGCCGTC GCCGGCGTGG CCCAGGTCAC GACCTATGGC CGGGACATCC GATCGCTGCA GGTACAGGTG CGCGCGGACG ACCTGGTCCG CTTCGGCATC GGAATGAACG ATGTGGTGGC CGCCGCGCGC AAGGCAACCG GTGTCCGCGG TGCCGGCTTC GTCGACACGG CCAACCAGCG TGTGATCCTG CAGACCCAGG GACAATCGCT GACACCGGAG CAACTCGCGC GAACGGTGCT GCTGCACCAA AGCGGCGCCA GCGTTGTGCT GGGCGACGTC GCAACGGTGG TGAGCGCTCC TGAGCCGCCG ATCGGCGGGG CGCTCATCAA CGGCAAGCCC GGCATCATGA TGATGATCAG CCAGCAATAT GGCGCCAACA CCCGCAACGT CGCCGCGCGG GTCGAGGCTG CGCTGCAGGA GCTGCGCCCG GCGCTCGACG GCGAGAAGGT CCAGCTGCAC GCCGATCTGT TTCGTCCGGC GACCTTCATC GATTCGGCGA TTCAGAACGT GTTGTTCGCG TTGCTGATCG GCGGTGCGCT GGTGATCGTC GTCCTGTTCC TGTTTCTCTC CGACTGGCGC ACCTCGGTGA TCAGTTGCAC CGCCATTCCG CTGTCGCTGT TCTCGGCGGT CCTGGCGCTG CAATGGATGG GGCAGAGCCT CGATACGATG ACCCTGGGCG GCCTGGCGAT CGCGATCGGC GAGGTGGTCG ACGATGCGGT GATCGGCGTC GAGAACGTGG TGCGACGGCT GCGCGAGAAC CGCGCGCTGC CGTCGCCGCG CGCTGCGGCG CGCGTCGTCT ACGACGCCAT GCTCGAGGTT CGCAGCGCCG TTGCGTATGC GACCTTCGCC GTGCTGCTGG TGTTCGTCCC CATCCTCGCA CTGCCCGGTC TTGCCGGCCG GTTGTTCGGG CCGCTCGGCA TCGCCTATAT CCTCGCCGTG CTGGCCTCGC TCATCGTGGC CCTGACGGTG ACGCCGGCTC TGGCCATGAT GCTGCTGGCC GGCCACAAGC CACGCGGCGC GCCACGCGAG CCGCCGCTGG CGCGCTGGTC GCGCCATTAC TATGAGCGCC TGTTGCGGCG GCTCGGCCGC TTTCCCAAGC TGGTCATGGC GACCGCCTTG CTGATCACGC TGGGAGGCGC CGGCCTCGTG CCCTGGTTCG GCGGCACCTT CCTGCCCGAC CTGAAGGAAG GCCATCTGAT CCTGCACGTG TCGATGCTGC CCGGCACGTC GCTCGACGAA TCACTGCGCC TTGGGACGAT GATCGCAGAG GCCCTGCGCG CAGTGCCCGA GGTACGCAGC GTGGCCCAGC ATGCCGGCCG CGCCGAGGCC GGCATCGATA CGGCCGGCAC CCATTCCAGC GAGATCGAGG TCGACTTTCA GCCGGGCCTG TCCGGCAACG CGCAGGAGCT CGCCGAACGG CGTATCCGCG CCGCCCTCGC CAACTTTGCC GGCATCAACC TGTCGATCAA GACTTATCTC ACGGAGCGCA TCGAGGAGAC CCTGTCCGGC TTCAACGCTG CCGTGGTCAT CAACGTGTTC GGCCCTGATC TCGACGACCT GGAGACTGCG GCGCGCGACA TTGCGCGCGA GCTCGGCGAG GTCTGGGGCG CCATCGACAT CCAGCAGCAA TCGCCGCCGG GCATGCCTCA GGTCAACGTC ACGCTGCGCC CGACCGACCT GCAATCCTGG GGCCTCGACG CCGTCGAAGT CCTGGAGCTG ATCCGCACCG CCTATCAAGG CGACGTGGTC GGCCAGGCCT ATGAAGGCAA CGTCGTCTTC AACGTGATCG TCAAGCTCGA TCCGGAGGCG AGCGCGCGCC CGATACAGAT CGGGGACATG CCGATCCGTA CGCCGAGCGG CGCCTATGTG CTCCTGAAGC AAATCGCCGA CGTCTACGGG ACGTCGGGGC GCTATGTCGT GCTCCATCGC AATGGTCAGC GCGTTCAGAC GGTGACCGCG AACGTGGCCG AGCGGGATCT CGAATCCTTC GTGGCCGCCG CCAAGAGGAA GATTGCCAAG GAGGTCAAGC TGCCGCCTGG CGCCCATGTC GAGTTCACCG GAGCCGCCGA GGCCCAGGCG AAATCGCGCC GTGATCTCGT CGTCAACGCC TCGCTGGCGA CGCTCGGCAT CGTGCTGCTG CTCGCGCTGG TCACCAAGCA TTGGCGCAAT CTCGCCTTGG TGCTGATCAA TCTTCCGTTC GCGTTCGTCG GCGGCGTGGT CGCGGTCGCG CTGACCGGCG GCGTGCTGTC GCTCGGATCG ATGGTGGGAT TCGTGACGCT GTTTGGCATC GCGCTGCGCA ACTCGATCCT GATGATTTCG CACTACGAGC ACCTGGTCGC GGTCGAAGGC CGCAGCTGGA GCCTCGATCT GGCCATCCAG GGCGCGGCCG ACCGGCTCGT CCCGATCCTC ATGACCTCGC TGGTGACCGG CCTCGGCCTC CTGCCGCTGG CGCTCGGTGC CGGCGAGCCG GGCCGTGAAA TCGAGGGACC GATGGCGATC GTCATCCTCG GCGGGCTGCT GACCTCGATG GCGCTGAACC TGCTGGTGCT GCCGACGCTG GCCGTCCGCT TCGGCCGGTT CGTGGCCGAT CCCGCCAGCC CGGCCCCCGG CCTCGCCACG CCGGGGTGA
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Protein sequence | MIDGMRAVAG PQAALIAFAI RFRGIVLALA CTILGYGLFS LGEAKYGVFP EFAPPQVSIQ TEAPGLSPEQ VEVLVTQPIE TSINGLAGVE SMRSSSIQGL SVLSVIFQPG TDVFRARQLV AERLTAIVNG LPQGVRAPSM TPLVPAAGTV LVIGLTSEQR SLMDLRTIAD WTVSRRLLAV AGVAQVTTYG RDIRSLQVQV RADDLVRFGI GMNDVVAAAR KATGVRGAGF VDTANQRVIL QTQGQSLTPE QLARTVLLHQ SGASVVLGDV ATVVSAPEPP IGGALINGKP GIMMMISQQY GANTRNVAAR VEAALQELRP ALDGEKVQLH ADLFRPATFI DSAIQNVLFA LLIGGALVIV VLFLFLSDWR TSVISCTAIP LSLFSAVLAL QWMGQSLDTM TLGGLAIAIG EVVDDAVIGV ENVVRRLREN RALPSPRAAA RVVYDAMLEV RSAVAYATFA VLLVFVPILA LPGLAGRLFG PLGIAYILAV LASLIVALTV TPALAMMLLA GHKPRGAPRE PPLARWSRHY YERLLRRLGR FPKLVMATAL LITLGGAGLV PWFGGTFLPD LKEGHLILHV SMLPGTSLDE SLRLGTMIAE ALRAVPEVRS VAQHAGRAEA GIDTAGTHSS EIEVDFQPGL SGNAQELAER RIRAALANFA GINLSIKTYL TERIEETLSG FNAAVVINVF GPDLDDLETA ARDIARELGE VWGAIDIQQQ SPPGMPQVNV TLRPTDLQSW GLDAVEVLEL IRTAYQGDVV GQAYEGNVVF NVIVKLDPEA SARPIQIGDM PIRTPSGAYV LLKQIADVYG TSGRYVVLHR NGQRVQTVTA NVAERDLESF VAAAKRKIAK EVKLPPGAHV EFTGAAEAQA KSRRDLVVNA SLATLGIVLL LALVTKHWRN LALVLINLPF AFVGGVVAVA LTGGVLSLGS MVGFVTLFGI ALRNSILMIS HYEHLVAVEG RSWSLDLAIQ GAADRLVPIL MTSLVTGLGL LPLALGAGEP GREIEGPMAI VILGGLLTSM ALNLLVLPTL AVRFGRFVAD PASPAPGLAT PG
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