Gene BBta_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1297 
Symbol 
ID5148958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1378285 
End bp1381443 
Gene Length3159 bp 
Protein Length1052 aa 
Translation table11 
GC content67% 
IMG OID640556284 
Productmultidrug ABC transporter 
Protein accessionYP_001237443 
Protein GI148252858 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3696] Putative silver efflux pump 
TIGRFAM ID[TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.777713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATG GCATGCGTGC GGTCGCGGGC CCGCAGGCCG CGTTGATCGC GTTCGCGATC 
CGCTTTCGTG GCATCGTGCT GGCGTTGGCC TGCACGATCC TGGGCTACGG ACTGTTCTCA
CTCGGCGAGG CCAAATATGG CGTCTTCCCG GAATTCGCCC CGCCGCAGGT CTCGATCCAG
ACAGAAGCCC CGGGCCTCAG CCCGGAACAG GTCGAGGTGC TCGTCACCCA GCCGATCGAA
ACCTCGATCA ACGGCTTGGC CGGCGTCGAG AGCATGCGCT CCTCGTCGAT CCAGGGGCTC
TCGGTTCTTT CGGTCATCTT CCAGCCCGGC ACTGACGTGT TCAGGGCCCG GCAATTGGTG
GCGGAGCGCC TGACCGCCAT CGTCAACGGC CTGCCGCAGG GCGTGCGGGC CCCCTCGATG
ACCCCGCTCG TTCCGGCCGC CGGCACCGTC CTCGTCATCG GACTGACGTC GGAGCAGCGA
TCGTTGATGG ATCTGCGCAC GATCGCCGAC TGGACCGTGA GTCGTCGCCT GCTCGCCGTC
GCCGGCGTGG CCCAGGTCAC GACCTATGGC CGGGACATCC GATCGCTGCA GGTACAGGTG
CGCGCGGACG ACCTGGTCCG CTTCGGCATC GGAATGAACG ATGTGGTGGC CGCCGCGCGC
AAGGCAACCG GTGTCCGCGG TGCCGGCTTC GTCGACACGG CCAACCAGCG TGTGATCCTG
CAGACCCAGG GACAATCGCT GACACCGGAG CAACTCGCGC GAACGGTGCT GCTGCACCAA
AGCGGCGCCA GCGTTGTGCT GGGCGACGTC GCAACGGTGG TGAGCGCTCC TGAGCCGCCG
ATCGGCGGGG CGCTCATCAA CGGCAAGCCC GGCATCATGA TGATGATCAG CCAGCAATAT
GGCGCCAACA CCCGCAACGT CGCCGCGCGG GTCGAGGCTG CGCTGCAGGA GCTGCGCCCG
GCGCTCGACG GCGAGAAGGT CCAGCTGCAC GCCGATCTGT TTCGTCCGGC GACCTTCATC
GATTCGGCGA TTCAGAACGT GTTGTTCGCG TTGCTGATCG GCGGTGCGCT GGTGATCGTC
GTCCTGTTCC TGTTTCTCTC CGACTGGCGC ACCTCGGTGA TCAGTTGCAC CGCCATTCCG
CTGTCGCTGT TCTCGGCGGT CCTGGCGCTG CAATGGATGG GGCAGAGCCT CGATACGATG
ACCCTGGGCG GCCTGGCGAT CGCGATCGGC GAGGTGGTCG ACGATGCGGT GATCGGCGTC
GAGAACGTGG TGCGACGGCT GCGCGAGAAC CGCGCGCTGC CGTCGCCGCG CGCTGCGGCG
CGCGTCGTCT ACGACGCCAT GCTCGAGGTT CGCAGCGCCG TTGCGTATGC GACCTTCGCC
GTGCTGCTGG TGTTCGTCCC CATCCTCGCA CTGCCCGGTC TTGCCGGCCG GTTGTTCGGG
CCGCTCGGCA TCGCCTATAT CCTCGCCGTG CTGGCCTCGC TCATCGTGGC CCTGACGGTG
ACGCCGGCTC TGGCCATGAT GCTGCTGGCC GGCCACAAGC CACGCGGCGC GCCACGCGAG
CCGCCGCTGG CGCGCTGGTC GCGCCATTAC TATGAGCGCC TGTTGCGGCG GCTCGGCCGC
TTTCCCAAGC TGGTCATGGC GACCGCCTTG CTGATCACGC TGGGAGGCGC CGGCCTCGTG
CCCTGGTTCG GCGGCACCTT CCTGCCCGAC CTGAAGGAAG GCCATCTGAT CCTGCACGTG
TCGATGCTGC CCGGCACGTC GCTCGACGAA TCACTGCGCC TTGGGACGAT GATCGCAGAG
GCCCTGCGCG CAGTGCCCGA GGTACGCAGC GTGGCCCAGC ATGCCGGCCG CGCCGAGGCC
GGCATCGATA CGGCCGGCAC CCATTCCAGC GAGATCGAGG TCGACTTTCA GCCGGGCCTG
TCCGGCAACG CGCAGGAGCT CGCCGAACGG CGTATCCGCG CCGCCCTCGC CAACTTTGCC
GGCATCAACC TGTCGATCAA GACTTATCTC ACGGAGCGCA TCGAGGAGAC CCTGTCCGGC
TTCAACGCTG CCGTGGTCAT CAACGTGTTC GGCCCTGATC TCGACGACCT GGAGACTGCG
GCGCGCGACA TTGCGCGCGA GCTCGGCGAG GTCTGGGGCG CCATCGACAT CCAGCAGCAA
TCGCCGCCGG GCATGCCTCA GGTCAACGTC ACGCTGCGCC CGACCGACCT GCAATCCTGG
GGCCTCGACG CCGTCGAAGT CCTGGAGCTG ATCCGCACCG CCTATCAAGG CGACGTGGTC
GGCCAGGCCT ATGAAGGCAA CGTCGTCTTC AACGTGATCG TCAAGCTCGA TCCGGAGGCG
AGCGCGCGCC CGATACAGAT CGGGGACATG CCGATCCGTA CGCCGAGCGG CGCCTATGTG
CTCCTGAAGC AAATCGCCGA CGTCTACGGG ACGTCGGGGC GCTATGTCGT GCTCCATCGC
AATGGTCAGC GCGTTCAGAC GGTGACCGCG AACGTGGCCG AGCGGGATCT CGAATCCTTC
GTGGCCGCCG CCAAGAGGAA GATTGCCAAG GAGGTCAAGC TGCCGCCTGG CGCCCATGTC
GAGTTCACCG GAGCCGCCGA GGCCCAGGCG AAATCGCGCC GTGATCTCGT CGTCAACGCC
TCGCTGGCGA CGCTCGGCAT CGTGCTGCTG CTCGCGCTGG TCACCAAGCA TTGGCGCAAT
CTCGCCTTGG TGCTGATCAA TCTTCCGTTC GCGTTCGTCG GCGGCGTGGT CGCGGTCGCG
CTGACCGGCG GCGTGCTGTC GCTCGGATCG ATGGTGGGAT TCGTGACGCT GTTTGGCATC
GCGCTGCGCA ACTCGATCCT GATGATTTCG CACTACGAGC ACCTGGTCGC GGTCGAAGGC
CGCAGCTGGA GCCTCGATCT GGCCATCCAG GGCGCGGCCG ACCGGCTCGT CCCGATCCTC
ATGACCTCGC TGGTGACCGG CCTCGGCCTC CTGCCGCTGG CGCTCGGTGC CGGCGAGCCG
GGCCGTGAAA TCGAGGGACC GATGGCGATC GTCATCCTCG GCGGGCTGCT GACCTCGATG
GCGCTGAACC TGCTGGTGCT GCCGACGCTG GCCGTCCGCT TCGGCCGGTT CGTGGCCGAT
CCCGCCAGCC CGGCCCCCGG CCTCGCCACG CCGGGGTGA
 
Protein sequence
MIDGMRAVAG PQAALIAFAI RFRGIVLALA CTILGYGLFS LGEAKYGVFP EFAPPQVSIQ 
TEAPGLSPEQ VEVLVTQPIE TSINGLAGVE SMRSSSIQGL SVLSVIFQPG TDVFRARQLV
AERLTAIVNG LPQGVRAPSM TPLVPAAGTV LVIGLTSEQR SLMDLRTIAD WTVSRRLLAV
AGVAQVTTYG RDIRSLQVQV RADDLVRFGI GMNDVVAAAR KATGVRGAGF VDTANQRVIL
QTQGQSLTPE QLARTVLLHQ SGASVVLGDV ATVVSAPEPP IGGALINGKP GIMMMISQQY
GANTRNVAAR VEAALQELRP ALDGEKVQLH ADLFRPATFI DSAIQNVLFA LLIGGALVIV
VLFLFLSDWR TSVISCTAIP LSLFSAVLAL QWMGQSLDTM TLGGLAIAIG EVVDDAVIGV
ENVVRRLREN RALPSPRAAA RVVYDAMLEV RSAVAYATFA VLLVFVPILA LPGLAGRLFG
PLGIAYILAV LASLIVALTV TPALAMMLLA GHKPRGAPRE PPLARWSRHY YERLLRRLGR
FPKLVMATAL LITLGGAGLV PWFGGTFLPD LKEGHLILHV SMLPGTSLDE SLRLGTMIAE
ALRAVPEVRS VAQHAGRAEA GIDTAGTHSS EIEVDFQPGL SGNAQELAER RIRAALANFA
GINLSIKTYL TERIEETLSG FNAAVVINVF GPDLDDLETA ARDIARELGE VWGAIDIQQQ
SPPGMPQVNV TLRPTDLQSW GLDAVEVLEL IRTAYQGDVV GQAYEGNVVF NVIVKLDPEA
SARPIQIGDM PIRTPSGAYV LLKQIADVYG TSGRYVVLHR NGQRVQTVTA NVAERDLESF
VAAAKRKIAK EVKLPPGAHV EFTGAAEAQA KSRRDLVVNA SLATLGIVLL LALVTKHWRN
LALVLINLPF AFVGGVVAVA LTGGVLSLGS MVGFVTLFGI ALRNSILMIS HYEHLVAVEG
RSWSLDLAIQ GAADRLVPIL MTSLVTGLGL LPLALGAGEP GREIEGPMAI VILGGLLTSM
ALNLLVLPTL AVRFGRFVAD PASPAPGLAT PG