| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1296 |
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| Symbol | |
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| ID | 5148957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1375507 |
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| End bp | 1378134 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640556283 |
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| Product | putative spermine/spermidine synthase family protein |
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| Protein accession | YP_001237442 |
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| Protein GI | 148252857 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCGACA CACACCCTGC CGCCGCCACC GGGACCGATG TCGTCGGGGC TCCCCACGAC
ACCCGCTTTA CCGCGCTGAC ATCGGACACG GCCAACCAGC CGGCATCGCG CCGGGCGATG
CCCGTCCTGA TCGCGGCCTC CGGACTTGCG GGGCTCGGCT ACGAGATCGT CTGGACGCGC
CAACTCAGTC TCGCTTTGGG AACCGAGATG ATGGCGGTGC TCGGCGCGAT CGCCGGCTTC
TTCGCCGGCC TGGCACTCGG GGCGTTCGTG CTGGACAGCC ATATTCGTCG CGCCACCAAG
CCGCACCAGG TCTATGCGGC TCTTGAAATC ATCATCGGCC TATGGGGCGT CTGCGCGATC
TGGCTGCTCC CGGCCAGCGC GCGGGCCTTG GCGCCGCTGC TGGGCACCGC TCCCTCGCCG
GTCCTGCTAT GGAGCGCCAG CTTCCTGCTG CCGACCCTGG TGCTGCTGCC GGCCACGGTC
GCGATGGGCG GCACGCTGAC GGCACTGGAG CGCATGATGT CCGCGGCGCA GGACGCCGGT
GCCGTCAGTG CCGGCGTCTA CGGCGCCAAC ACCGCCGGCG CAGTCGCCGG CACGCTGCTG
TCCACCTTCG TGCTGATCCC GACGCTCGGC TTCGCAACGA CGCTGCTGTG CCTTGCCGCG
GTGAACGCGG TCTGTGCGCT GGCCGCGCTC TATCTGGGCC GGCGGCTGGC GATCGAGCCA
CGCGCAGGCG CCGTGCGCGG ACATGCTGGG ATCGGCCCGA GGCTCACGAT CACCTTGTTC
GCCACCGGTC TGCTTGGCAT CGGCATCGAA GTGCTGGTCG TGCGCCTCGC GGCGCAGACG
ATGCAGGACA CCGTCTACAG CTTCGCCTGC CTGTTGTCCG CCTATCTGCT GGGGACCGCC
GCCGGCGGCC TCATCTGGCA GCGCCTCGGG CCGAGGATGA GGTCCGGCAA GACCGCGCTG
CTCGCCGGCA CCGCCTTCGC CGGGCTGGGC ACGGCGCTGC TGGCTCTCTC TCTCATCGAC
CTTGCGGATC GCGTGGCGGA CCAAGGCATT CCCGGTGAAC TTGGCATCGC CCTGCTACTG
TTTCTGCTGC CGGCGATGGC GATGGGCGCG CTGTTCGGCC AGCTCATGCA GGAGGTCCGC
GACATCAGCG GCTCAGTCGG CTGGGCGGTC GGCATCAACA GCCTCGGCGC CGCGATCGCC
CCGCTGCTCG CGGCCCAGTT GCTGATTCCA ACACTCGGCA CCTGGAGGGC GCTTGTGCTG
GCGGCGACGG GATATCTGCT GCTGCTGCAG CCGAGCCGCG CGGCGTTGCG CTGGGCGGCC
GGGCCAGCCC TGCTCGGCGC GCTGTTGCTG GCGTGGCCCG CTCCCAGCCC GGTGAAGGTG
CCCCATGGCG GCAAGCTGCT GGCGCTGCGC GAAGGGCCGA TGGCCACCGC GAGCGTCGTC
GATGATGCCT CCGGCGCGCG CTATCTGGAG GTGAACGGGC ACTTCCGCAT GGGTGGCACC
AGCTCCGTTC GCTCCGATTA TCGCCAAGCC ATGCTGCCGC TGCTGCTGCA TCCGGCGCCG
CGCACCGCGC TGTTCCTGGG GGTCGGCACC GGAGCGACCG TGCTCGGCGG CGCGCAGCTG
CCGGGCCTCG ACGTGCGCGC GGTCGAATTG TCCTCCGAGG TCGTCGCGTT GCTGCCATGG
TTCGACGACG GCGCGACCAA GCAGCCAATG CCGCCGATTA CGGTCGCCGA TGCGCGCCGC
TTCATCGTCG CGGATGGCGG ACGCTACGAC GTGATCGTCG CCGACCTGTT TCATCCGGCG
CTGGACGGCA GCGGGGCGCT GTATACGACG GAGCATTTCG ATGCGGTCAA GCAGCGGCTG
GCCGCCGATG GCGTGTTCTG CCAATGGCTG CCGCTCTACC AGCTCGATGC GCCCTCGCTG
CGGGCCATCA TCAGGAGCTT TCTCGCCATC TTCCCGGACG GCTCAGCCTG GCTGAACCAT
TACAGCGTCC GCACGCCGAT GCTCGCGCTG ATCGGATCAC GCGTCCCGCA AATGCTCGAT
CCCGGTCGGC TCGCCGCCCG GTTCTCGGAC CCGCAGCTCC GCCCTGTCCT TCAGCCGCTC
GGTTTCGACC GGCCCATCGA CCTGCTCGGG CAATATATCG CCGACGCCGG CGCCCTGGCG
CGCTTTGCAG GTCCGGGTCC GCGCAACACC GACGATTTTC CGTTCGTCAC CTTCGACGCC
CGGAGCAACG TCCGCGCGCT CTCGGCGCCG CCCTGGCAGT TGCTGTTGAC GGTCATCGGC
CAGACGACGA CCGATCCGGC CGGACTGATG CCGCAGGCGG ATCGCCCCGC CTGGGACCAG
CGCCTGAACG CCTATGGGCA GGCGCGCAAT CGCTTCCTGC AGGCCGGCGC GGCACTCACC
GGCGACCCGC GCGGCGCGGC CTTGATCGCA GCGGCGGCGC CAGGCCTTCT CGACTCGGTC
CGCCTCAGCG CCGAGTTCGA GCCGGCCTAT GCGCCGCTGA TGAGCATGGC CAGAGCGCTG
CTCGCGTCGG ACCGGCGGGG CGCGGAACGC CTGCTCCGCG CCATCGACGC GGCGGCGCCG
TCACGCCGCG AGGCGCACGA TCTGCTGACC CAGGAATTCG GCGGATGA
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| Protein sequence | MPDTHPAAAT GTDVVGAPHD TRFTALTSDT ANQPASRRAM PVLIAASGLA GLGYEIVWTR
QLSLALGTEM MAVLGAIAGF FAGLALGAFV LDSHIRRATK PHQVYAALEI IIGLWGVCAI
WLLPASARAL APLLGTAPSP VLLWSASFLL PTLVLLPATV AMGGTLTALE RMMSAAQDAG
AVSAGVYGAN TAGAVAGTLL STFVLIPTLG FATTLLCLAA VNAVCALAAL YLGRRLAIEP
RAGAVRGHAG IGPRLTITLF ATGLLGIGIE VLVVRLAAQT MQDTVYSFAC LLSAYLLGTA
AGGLIWQRLG PRMRSGKTAL LAGTAFAGLG TALLALSLID LADRVADQGI PGELGIALLL
FLLPAMAMGA LFGQLMQEVR DISGSVGWAV GINSLGAAIA PLLAAQLLIP TLGTWRALVL
AATGYLLLLQ PSRAALRWAA GPALLGALLL AWPAPSPVKV PHGGKLLALR EGPMATASVV
DDASGARYLE VNGHFRMGGT SSVRSDYRQA MLPLLLHPAP RTALFLGVGT GATVLGGAQL
PGLDVRAVEL SSEVVALLPW FDDGATKQPM PPITVADARR FIVADGGRYD VIVADLFHPA
LDGSGALYTT EHFDAVKQRL AADGVFCQWL PLYQLDAPSL RAIIRSFLAI FPDGSAWLNH
YSVRTPMLAL IGSRVPQMLD PGRLAARFSD PQLRPVLQPL GFDRPIDLLG QYIADAGALA
RFAGPGPRNT DDFPFVTFDA RSNVRALSAP PWQLLLTVIG QTTTDPAGLM PQADRPAWDQ
RLNAYGQARN RFLQAGAALT GDPRGAALIA AAAPGLLDSV RLSAEFEPAY APLMSMARAL
LASDRRGAER LLRAIDAAAP SRREAHDLLT QEFGG
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