| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1279 |
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| Symbol | gspF |
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| ID | 5150033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1361796 |
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| End bp | 1363007 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640556266 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_001237425 |
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| Protein GI | 148252840 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAAGCT ACCGCTATCG CGCATTGACA CAGTCCGGCG AGATCGTCGT GGGATCCCTC
GTGGCGCCGT CGCGCAGCGA GGTCGAACGG CGCATCTCAT ATCTTCAGCT GCTGCCGATC
GAGACGATCG AGGAGAAGAC GTCGGGCTCG GGGGCCGCGT CCGGGTTCGC CTTCGGCGCG
CCGTCAGCCG CCGAAGTCAC CACCTTCACG CGCGATCTGG CGCTGCTTCT CAAGGCGGGC
GCGCGGCTCG ACGATGCGCT GGAGCTGCTG TCGGGCGACT CGGAGGTCGG GCGCCTGCGC
CCTGTGGTGG CTCGTCTGCG AACGGCCATC ATGGCCGGTG AGAGCTTCGC CGACGCCGCG
GCCGCGCAGC CGCGCCTGTT CTCACCGATG TATGTCGCGC TGATGCGCGT GGGCGAAGCC
TCGGGCACGC TCGATCATGT GCTGACGGCG CTCGCCGGCG AACGCGAGCG CTCCGAGGCG
ACGCGGCGCA AGCTCACCGA CGCGATGCAG TACCCCGCTT TCGTCTTTCT CGCGGCGATC
GGCGTGATGC TGTTCTTCCT CGTGGCCGTG CTGCCGAATT TCTCGGCGGT GCTGCGCGAT
TTCGGCGGTC GCGCCGATAC GGCGCTCGGC TTCTTCATGT CGCTGTCCGA CATCGTGCGG
GCCAATGCGG CGGCCATCAC GCTCGGCTGC GCGATGCTGA TCGCTGCCGT CTGGTGGCTG
CTGCGCCAGC CTGCGGTCCG CGCTGCACTG ACCAGCGCGC TGGCGGTGAT CCCCGGCATC
GGCGACATCC TGATGTTCTA TCGGACCAGC CTGTTCTGCC GCAATCTCGG CCTGCTGCTC
GGCTGCGGCG TCACGCTCAG CGCGGCATTG CGTATTCTGG TCGACGTGAT GGCGGTGACG
TCGTCACGAG CGCCGTGGTC GGCCGCCGCG GACCGCGTGC GCCATGGCGG CAAGCTGTCC
CAGGCGCTGT CCGCCGACAA CATGCTGCCG CCGATGGCGC TGCGCATGCT GCGCCTCGGT
GAGGAGACCG GCCAGTTGCC GACGCTCTCG ACCCGCATCG CCGAGTTCTA TGAATCCAAG
CTGCAGCGTG GGCTTGACCG TGTCGTCGGT ATCGTCGGTC CTGCCGCGAT CCTGCTGATC
AGCGTCGTCG TCGGCGGCTT GATCGTCTCG ATCATGACGG CGCTGCTCTC CGTCACGCAA
CTCGTCGGCT GA
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| Protein sequence | MPSYRYRALT QSGEIVVGSL VAPSRSEVER RISYLQLLPI ETIEEKTSGS GAASGFAFGA
PSAAEVTTFT RDLALLLKAG ARLDDALELL SGDSEVGRLR PVVARLRTAI MAGESFADAA
AAQPRLFSPM YVALMRVGEA SGTLDHVLTA LAGERERSEA TRRKLTDAMQ YPAFVFLAAI
GVMLFFLVAV LPNFSAVLRD FGGRADTALG FFMSLSDIVR ANAAAITLGC AMLIAAVWWL
LRQPAVRAAL TSALAVIPGI GDILMFYRTS LFCRNLGLLL GCGVTLSAAL RILVDVMAVT
SSRAPWSAAA DRVRHGGKLS QALSADNMLP PMALRMLRLG EETGQLPTLS TRIAEFYESK
LQRGLDRVVG IVGPAAILLI SVVVGGLIVS IMTALLSVTQ LVG
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