| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1278 |
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| Symbol | gspE |
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| ID | 5150032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1360138 |
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| End bp | 1361787 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640556265 |
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| Product | general secretion pathway protein E (Type II traffic warden ATPase) |
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| Protein accession | YP_001237424 |
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| Protein GI | 148252839 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGTA CGCTGTCGAC CCAGTTTCAG GCCTATCTTC GTCAGCGGCA TCCGCAGCGC
TCGGGCGAGC CTGCCGGCGA CACGCAGCTC GCGCTCTGGG ATCGGTTCGG CCTGTCGGCC
GAGGCCTTTG CCGAGGAGGC CGTGCAGTTC ACCGGGCTGG ATCGCGCATC CCTGCGCGAG
CTGATGGCGG CGACGCCCGC GGTCAGCGAA TTCTCGGACC GCTTCCTGCG CGAAGTGCTC
GGCTATCCCT ACCGGAGCTC CGAGGGCAGC GCCAATTTTG CCATGGCCGA TCCGACCGAT
CAGGCGGTGC GGCGGGCCGC CGAACTGGTG CTCGGCCCTG ACATTATATT TAAGGTCGCG
TCGCACGAGG ACATTGCGGT CGTGCTCGAC CAGCGGCTGG CCGCTGGAGA GGAAGCCGAC
ATCTCGCCGG TCCAGGACCT GCGCGACGAC GACATCGAAA GCCTGCGGGA TCTGGCGAGC
GGCGCGCCGG TGGTGCGGGC GGTCAACGAT CTCATCGAGA AGGCCGTGGA AATGCGCGCC
AGCGACATCC ACATCGAGCC GTTCTCGACC GGGCTCGTCG TCCGGCTCCG CGTCGACGGG
CTGTTGCGTC CGATCGCAGC GCCGGCGGGC GTGCTGCCGC AGGCCGTGAT CTCCCGCATC
AAGATCGTCG CGGGCCTGAA CATTGCGGAG CGGCGACTGC CGCAGGACGG CGCCGCGCGC
ATTCGCGCCG GCCGCGCGGA GATCGACGTC CGCGTCGCGA TCATGCCGAC GCAGCATGGT
GAGACCGCCG TGCTCCGCAT CCTGCCCAAG GATCGCTCGC AGCTCGTCGC GAGCCGTCTC
GGCCTGTCCC AGCGCGATGA CGCCGCGCTC CGCCGCCTGA TCGCGCTACC GCACGGCATG
ATCGTGATCA CCGGACCGAC CGGCAGCGGC AAGACAACGA CGCTGGCGAC CATCCTGTCG
ATGCTCAACA CTCCGGAACG CAAGATCCTC ACGATCGAGG ACCCGGTGGA ATATGAGATT
CCCGGCATCA ACCAGTCGCA GATCAAGCCG GCGATCGGGC TGACATTCGC CACCGCTCTG
CGCTCCTTCG TCCGGCAAGA CCCCGACGTC ATCATGGTCG GCGAGATCCG AGACAACGAG
ACCGCGCATG TCGCGGTTCA CGCCGCGCTG ACCGGCCATC TCGTGCTGAC GACATTACAT
ACCGAGACCG CGGCGGCGGC GGTGCCGCGG CTGCTCGATC TCGGCGTCGA GGGCTATCTG
CTGCGATCGA CATTGCGCGC CGTCATCGCG CAGCGGCTGG TGCGCCAGCT TTGCGATCAT
TGCAAGATCG CCAAGCCGCT CGACGAGGAG ACCTGTCGGA ACGATCCGCG CTTCGGCCAT
TTGGGCCTCG CGGCCGGGGA CGTGACATGG CATCCCGTCG GCTGCGAGCG ATGCGGCCAG
AGCGGTTACC GCGGACGCGT CGGTGTGTTC GAGATGCTCG AACTGACGAG CAGCCTGCGC
GAGCTGATCG CGGACAGCGC CGATGGCCTG GCGATCGATC GGCTGGCGAT GCGGGAGGGC
ATGACGACGA TGCTCGACGA CGGCGTCGCC AAGTGCCGCG CCGGCGTCAC TTCGACCTCC
GAGCTGTTTC GTGTCCTCGT CGCGCGCTGA
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| Protein sequence | MSGTLSTQFQ AYLRQRHPQR SGEPAGDTQL ALWDRFGLSA EAFAEEAVQF TGLDRASLRE
LMAATPAVSE FSDRFLREVL GYPYRSSEGS ANFAMADPTD QAVRRAAELV LGPDIIFKVA
SHEDIAVVLD QRLAAGEEAD ISPVQDLRDD DIESLRDLAS GAPVVRAVND LIEKAVEMRA
SDIHIEPFST GLVVRLRVDG LLRPIAAPAG VLPQAVISRI KIVAGLNIAE RRLPQDGAAR
IRAGRAEIDV RVAIMPTQHG ETAVLRILPK DRSQLVASRL GLSQRDDAAL RRLIALPHGM
IVITGPTGSG KTTTLATILS MLNTPERKIL TIEDPVEYEI PGINQSQIKP AIGLTFATAL
RSFVRQDPDV IMVGEIRDNE TAHVAVHAAL TGHLVLTTLH TETAAAAVPR LLDLGVEGYL
LRSTLRAVIA QRLVRQLCDH CKIAKPLDEE TCRNDPRFGH LGLAAGDVTW HPVGCERCGQ
SGYRGRVGVF EMLELTSSLR ELIADSADGL AIDRLAMREG MTTMLDDGVA KCRAGVTSTS
ELFRVLVAR
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