| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1260 |
|---|
| Symbol | |
|---|
| ID | 5156294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1340959 |
|---|
| End bp | 1341717 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640556247 |
|---|
| Product | putative amino-acid ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001237406 |
|---|
| Protein GI | 148252821 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.498461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0306795 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAAGT CGTTCGGCGC GGTCAGCGTG CTCAAGGACA TTTCGCTCAG CGTGCCGCGT
GGCGGCGTGG TCGCGCTGAT CGGTCCGAGC GGGTCCGGCA AGTCAACCTT GCTGAGATGC
CTCAATCTGC TGACGATCCC GGACAGCGGC GTCATCCGGG TGGATCAGCG CATGATGGAT
TTCACCAACG GCCACAAGCT GCCGGCCGAC AAGGAGCTCG TGGCCTTCCG CGCCCGCACC
GGCATGGTGT TCCAGAACTT CAACCTGTTC CCGCATATGT CCGCCGTCCA GAACGTGATG
GAGGGGCCGG TCACGGTGCA GAAGGTCGAG CGCGGGGCGG CGCGCGACGC CGCGCTCAAG
CTGCTGGAGA AGGTCGGGTT GAAGGACAAG GCCGATGTCG CGCCGGACAA GCTGTCAGGT
GGCCAGAAGC AGCGCGTGGC GATCGCGCGC GCTTTGGCGA TGAAGCCGGA GGTGATGCTG
TTCGACGAGG CGACCTCCGC GCTCGATCCG GAGCTGGTCG GCGAGGTCCT GGCGGTGGTC
CGCCAGCTCG CCGCTGAAGG CATGACCATG GTGCTCGTGA CCCACGAGAT GGCGTTCGCG
CGCGAGGTCG CCGATACCGT CGTGTTCATG CGCGACGGCG TCGTCGTGGA GGAGGGGCCG
GCCGCGCAGG TCATCGATGC GCCGCGTCAG CCGGCGACGC GAACCATCCT CAGCCACTTC
CACAGCGGCG GCCGGACGAC GGCAGCCGTG AGCCCATGA
|
|---|
| Protein sequence | MKKSFGAVSV LKDISLSVPR GGVVALIGPS GSGKSTLLRC LNLLTIPDSG VIRVDQRMMD
FTNGHKLPAD KELVAFRART GMVFQNFNLF PHMSAVQNVM EGPVTVQKVE RGAARDAALK
LLEKVGLKDK ADVAPDKLSG GQKQRVAIAR ALAMKPEVML FDEATSALDP ELVGEVLAVV
RQLAAEGMTM VLVTHEMAFA REVADTVVFM RDGVVVEEGP AAQVIDAPRQ PATRTILSHF
HSGGRTTAAV SP
|
|---|
| |