Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1258 |
Symbol | |
ID | 5151397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1338271 |
End bp | 1339089 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640556245 |
Product | putative amino acid ABC transporter ATP-binding protein |
Protein accession | YP_001237404 |
Protein GI | 148252819 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0213025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAACGA GCGAGGCGAA TGCTCCCATG TCCGATGCCG CGATGATCGA GCTCATCCAC GTGAAAAAGT CCTTCGGAGC GGTGAGCGTG CTCAAGGATA TTTCCCTGCG CGTGCCCCGC GGCGGCGTCG TTGCGCTGAT CGGGCCGAGC GGCTCGGGCA AGTCCACGCT GCTCAGGTGC CTCAATCTGC TGACCCTCCC GGAAAGCGGA GTCATTCGCG TCGGTCGAAG CACCATGGAC TTCACGAACG GGCATCAACT GCCGCGCGAC AAGGATCTCG CAGCGTTTCG TGCGCGAACC GGCATGGTGT TCCAGAACTT CAACCTGTTT CCGCATATGT CGGTCATCCG GAACGTGATG GAGGGGCCCG TCACCGTCCT GAAAGTTCGG CCGGACGAGG CGCGCCAGAC GGCGCTGGCG TTGTTGGACA AGGTCGGATT GCGAGACAAG GCCGACGTTG CCCCGGACAA GCTGTCCGGA GGCCAGAAGC AGCGCGTCGC GATCGCCCGT GCGCTGGCGA TGAAGCCGGA GGTGATGTTG TTCGACGAAG CGACGTCGGC GCTCGATCCT GAGCTCGTCG GCGAAGTGCT GGCGGTCGTT CGCCAGCTCG CGGCTGAGGG CATGACGATG GTGCTCGTGA CGCACGAAAT GGCGTTCGCG CGCGAGGTGG CCGACACTGT GGTCTTCATG CGCGATGGCG TGGTGGTGGA GGACGGGCCG GCACGACAGG TGATCGATAC GCCGCGGGAG GCCGCGACAC GCGCCTTCCT CAGTCATTTC CATAGCGGCC GGTTGCCGGC AGCCGCGGCC AACGCGTGA
|
Protein sequence | MSTSEANAPM SDAAMIELIH VKKSFGAVSV LKDISLRVPR GGVVALIGPS GSGKSTLLRC LNLLTLPESG VIRVGRSTMD FTNGHQLPRD KDLAAFRART GMVFQNFNLF PHMSVIRNVM EGPVTVLKVR PDEARQTALA LLDKVGLRDK ADVAPDKLSG GQKQRVAIAR ALAMKPEVML FDEATSALDP ELVGEVLAVV RQLAAEGMTM VLVTHEMAFA REVADTVVFM RDGVVVEDGP ARQVIDTPRE AATRAFLSHF HSGRLPAAAA NA
|
| |