Gene BBta_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1258 
Symbol 
ID5151397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1338271 
End bp1339089 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content65% 
IMG OID640556245 
Productputative amino acid ABC transporter ATP-binding protein 
Protein accessionYP_001237404 
Protein GI148252819 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0213025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACGA GCGAGGCGAA TGCTCCCATG TCCGATGCCG CGATGATCGA GCTCATCCAC 
GTGAAAAAGT CCTTCGGAGC GGTGAGCGTG CTCAAGGATA TTTCCCTGCG CGTGCCCCGC
GGCGGCGTCG TTGCGCTGAT CGGGCCGAGC GGCTCGGGCA AGTCCACGCT GCTCAGGTGC
CTCAATCTGC TGACCCTCCC GGAAAGCGGA GTCATTCGCG TCGGTCGAAG CACCATGGAC
TTCACGAACG GGCATCAACT GCCGCGCGAC AAGGATCTCG CAGCGTTTCG TGCGCGAACC
GGCATGGTGT TCCAGAACTT CAACCTGTTT CCGCATATGT CGGTCATCCG GAACGTGATG
GAGGGGCCCG TCACCGTCCT GAAAGTTCGG CCGGACGAGG CGCGCCAGAC GGCGCTGGCG
TTGTTGGACA AGGTCGGATT GCGAGACAAG GCCGACGTTG CCCCGGACAA GCTGTCCGGA
GGCCAGAAGC AGCGCGTCGC GATCGCCCGT GCGCTGGCGA TGAAGCCGGA GGTGATGTTG
TTCGACGAAG CGACGTCGGC GCTCGATCCT GAGCTCGTCG GCGAAGTGCT GGCGGTCGTT
CGCCAGCTCG CGGCTGAGGG CATGACGATG GTGCTCGTGA CGCACGAAAT GGCGTTCGCG
CGCGAGGTGG CCGACACTGT GGTCTTCATG CGCGATGGCG TGGTGGTGGA GGACGGGCCG
GCACGACAGG TGATCGATAC GCCGCGGGAG GCCGCGACAC GCGCCTTCCT CAGTCATTTC
CATAGCGGCC GGTTGCCGGC AGCCGCGGCC AACGCGTGA
 
Protein sequence
MSTSEANAPM SDAAMIELIH VKKSFGAVSV LKDISLRVPR GGVVALIGPS GSGKSTLLRC 
LNLLTLPESG VIRVGRSTMD FTNGHQLPRD KDLAAFRART GMVFQNFNLF PHMSVIRNVM
EGPVTVLKVR PDEARQTALA LLDKVGLRDK ADVAPDKLSG GQKQRVAIAR ALAMKPEVML
FDEATSALDP ELVGEVLAVV RQLAAEGMTM VLVTHEMAFA REVADTVVFM RDGVVVEDGP
ARQVIDTPRE AATRAFLSHF HSGRLPAAAA NA