| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1251 |
|---|
| Symbol | |
|---|
| ID | 5152338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1331305 |
|---|
| End bp | 1332207 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640556238 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001237397 |
|---|
| Protein GI | 148252812 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.255094 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCC AGACACCGCG CCGCTTCCTG CCCTCTACCG CAGTCCTCGC CGCCTTCGAG
GCGACGGCCC GCACCGGCAG CATGACGATG GCGGCGCAGG AGCTCCAGCT GACACAGAGC
GCGGTCAGCC GGCAGATCAA GATCCTAGAG CAGCAGCTCG AGGCCGAGCT ATTCATTCGC
GAACGCCAGA CGGTGCGGCT CACCTCCGCC GGAGCGTCCT ATGCGCGCGA GATCCGCGAC
GCGCTCCACA AGATCAGCTC CGCCTCGTTG AACTTGCGGG CTAATCCGGG TGGGGGAACG
CTCAATCTCG GCATTCTCCC GACATTCGGG ACGCGCTGGC TGGCGCCGCG GCTGCCGCAA
TTCCTCGCGG CCAATCCCGG GATCACGATC AACCTTGCGA CGCGGCTGTC CTATTTCGAT
TTCGGCGCGG AAGCCCTGGA TGCTGCCATC CATTTCGGCC AGGCGGAATG GCCGGGCGCA
GAAATGGCCC TGCTGCGCTC CGAGCAGGTC ATCCCGGCGT GTAGTCCCGG CCTGAAACGG
GAGTATCGCT TTCGTGCCGC CGACGATCTC AGGCGGGCGC CGCTGCTTAG CATCTCGACC
CGGGCCCAGG CCTGGACGCG CTGGTTTGCG ATGCACGACG TCGCAGCCAG GGCAGCCCAG
GGAATGGTGT TCGATCAGTT TGCGACCGCG GCGCAGGCGG CGATGGCGGG CCTGGGCGTC
GCCTTGTTGC CGACATTCCT GATCGAGGAG GAGCTTGCGA GCCGCAAGCT GGTCCGCGCC
ATCAATCTGC CGATGGAGAG CCCGGAGCGC TACTATCTGG TCTGGCCATC GGAGCGTGCA
GCCTATCCGC CGCTTCGCGC GTTCCGGGAG TGGCTCATCG CGGTGACCGC GCCTGATCGA
TAG
|
|---|
| Protein sequence | MSIQTPRRFL PSTAVLAAFE ATARTGSMTM AAQELQLTQS AVSRQIKILE QQLEAELFIR
ERQTVRLTSA GASYAREIRD ALHKISSASL NLRANPGGGT LNLGILPTFG TRWLAPRLPQ
FLAANPGITI NLATRLSYFD FGAEALDAAI HFGQAEWPGA EMALLRSEQV IPACSPGLKR
EYRFRAADDL RRAPLLSIST RAQAWTRWFA MHDVAARAAQ GMVFDQFATA AQAAMAGLGV
ALLPTFLIEE ELASRKLVRA INLPMESPER YYLVWPSERA AYPPLRAFRE WLIAVTAPDR
|
|---|
| |