Gene BBta_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1250 
Symbol 
ID5152337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1329747 
End bp1331210 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content65% 
IMG OID640556237 
Producthypothetical protein 
Protein accessionYP_001237396 
Protein GI148252811 
COG category[S] Function unknown 
COG ID[COG5383] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.262777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGC GATCAGGGCC TCGCACGATC AGGCTGGTCC GGCCCCACTG GAGATCTCCG 
ATGCGAGCAC TGCACGCGGA CGCCGACAAC ATCCGCACCT TGTTTTCGCG CGCCATGTCG
GACATGTACC GCGCCGAGGT GCCGCAATAC GGAACGCTGA TGGAGTTGGT CAGCGAGGTC
AATCGGGCGA CCTTGCAACA GAGCGAGCAG TTGCGCGAGA GCCTCGAGCG GAGCGACGAA
CTCGAGCGAT TGAGCCTCGA GCGTCACGGC GCGATCCGCC TGGGACGCCC GGAGGAGTTG
TTCAACGTGC GCCGCGTGTT TGCCGTGATG GGCATGCACC CGGTCGGCTA CTACGACCTG
TCGGCCGCGG GCGTGCCGGT GCATGCGACG GCGTTTCGCC CGATCGACGA TGCGGCTCTG
CGCCGCAATC CGTTTCGGGT CTTCACCTCG CTGCTGCGCC TGGAGCTGAT CGAGGACGAC
GCGCTCCGCG CGGCAGCCCA GCGAATCCTC GGCGAGCGCA GCATCTTCAC GCCGCGCACC
CTCGAGCTCG TGGAGGTGTT CGAGACGCAG GGTTACCTGA CCGTCGCGCA GGCCGAGGAG
TTCGTCGGCG AAGCGCTGGA GACCTTCCGC TGGCACAGCG AGGCCACGGT CAGCCTCGAC
GTCTACCAGC AGCTGCATGA TGCACATCGG CTGATTGCCG ACGTGGTGAG CTTCAGGGGT
CCCCACATCA ATCATCTGAC ACCGCGCACG CTCGACATCG ACGCTGTCCA GGCCGGAATG
CCCGGACGCG GCATCGCGCC GAAGGCCGTC ATCGAGGGCC CGCCGCGCCG CGGCTGCCCA
ATCCTGCTGC GCCAGACCAG CTTCAAGGCG CTGGAGGAAC CGATCATCTT CATGCGGGAC
GACGGCACAT CGGCGCCCGG AACACATACT GCGCGCTTCG GCGAGATCGA ACAACGCGGC
GTGGCCCTGA CGCCGAAAGG GCGCGCGCTC TACGACGCGC TGCTTGCGTC GGCGCGCGAA
ACCGACGGTA TCGAAGCAAG CACGCGCAGC TACTCCGAGA GACTGGCCGA ACGCTTTGCG
GCGTTTCCCG ATGATTGGGC AACGCTACGA CAGGAAGGCC TGGCCTTCTT CCGCTATTCG
GCGACCGAGG CCGGGGCTGG ATCGGGCCAA GCTTGGACGT CCTCCGTCGA TGATCTGATT
GCCGAGGGGC TGCTGCGCTT CGATCCGATC ATCTACGAGG ATTTTCTCCC GGTGAGCGCT
GCCGGCATCT TCCAGTCGAA TCTCGGCTCC GAGGATCAGA GAACCTACGC GTCCAACGCC
AGCCGGTCCG CATTCGAGGC CGCCCTTGGC GCCAAGGTTT GCGATGACAT GGAGCTGTAC
GCGAGGGCGG AGCAGGAATC GCTGCAGCAG GCTCTGCTAC AGCTGAAATC ACCGCATTTC
GGACGCACGG CGATCGCCCG TTAG
 
Protein sequence
MTERSGPRTI RLVRPHWRSP MRALHADADN IRTLFSRAMS DMYRAEVPQY GTLMELVSEV 
NRATLQQSEQ LRESLERSDE LERLSLERHG AIRLGRPEEL FNVRRVFAVM GMHPVGYYDL
SAAGVPVHAT AFRPIDDAAL RRNPFRVFTS LLRLELIEDD ALRAAAQRIL GERSIFTPRT
LELVEVFETQ GYLTVAQAEE FVGEALETFR WHSEATVSLD VYQQLHDAHR LIADVVSFRG
PHINHLTPRT LDIDAVQAGM PGRGIAPKAV IEGPPRRGCP ILLRQTSFKA LEEPIIFMRD
DGTSAPGTHT ARFGEIEQRG VALTPKGRAL YDALLASARE TDGIEASTRS YSERLAERFA
AFPDDWATLR QEGLAFFRYS ATEAGAGSGQ AWTSSVDDLI AEGLLRFDPI IYEDFLPVSA
AGIFQSNLGS EDQRTYASNA SRSAFEAALG AKVCDDMELY ARAEQESLQQ ALLQLKSPHF
GRTAIAR