| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1247 |
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| Symbol | |
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| ID | 5152117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1325110 |
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| End bp | 1326414 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640556233 |
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| Product | putative phage related integrase |
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| Protein accession | YP_001237393 |
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| Protein GI | 148252808 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.578843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATCA AGCTTTCCAA ACGCACTGTT GACGCCATCG CTGCTGGTCC TCTCCCCGCC
ATTCAATACG ACGTGGAATT GCGAGGGTTC GGGGTTCGTA TCGGCGCGAG CGGCTCGCTC
AGTTGGTTCA TAGAATATCG GCCGGGTGCC GGTGGTCGGC GCGTCGCGAA GAGGCGGTAC
TACTTTGGGT CGCGCGAGTT CACGCCGGAG CAAGCGCGCC AGACCGCGAA GGAGCTGCTT
GCCAACGTGG CGTTGGGCGG CGATCCAATG AAGGATAGGC TTCACGAGCG CCAATCACTA
ACATTCAGCG AATTCGCCGA ACGGTACTTG TCCGAGGAAG CCGAACCGAA GTTGAAGCCT
GGCACGGTCG CGAACTACCG CATTGCCGTT CGCCGACATG CCAACCCCGA AATTGGCAAG
TTGAAGCTCC ACAAGATTTC GAACGCCGAT CTCGCGCGGC TGCACACCAA GATCGGCAAG
ACTAGCACGG TGAATGCAAA CCGGACCCTG GAATGCGTTT CGTCGATTTT TCGCTATGCG
GTCACCTGCG ACATCGTTCC GGTCGGCCAC AATCCGACCA AGGGAATTCG AGCCTTCCGG
GAGAATCGGC GCGAACGGTT CCTGAACTCC GACGAACTCG CCCGCCTTGG CAGCGCAATC
CGGGAAGCCG AGACGGTCGG CATTCCCTAC GAGATCGACG AGACAAAGCC GACTTCCAAA
CACGCACCGA AACCCGAAAA TCGTCGAACC AAGATCGACT CGTATACGGC AGCAGCGCTA
CGCCTGTTGA TCCTGACCGG CGCTCGCCTA CGCGAGATTC TTCACCTCAA GTGGGATTAC
GTGGACTTTG AACGCGGATT GCTGCTGTTG CCGGACTCCA AAACAGGACG AAAGGCTATC
GTGCTCAATG TGCCCGCCCT TGCAGTTTTG TCCAGCCTCG ACCGCAAGGG CCAATACGTC
ATTTTTTCCG AACAGGAAGA TAAGCCACGC GCCGACCTAA ACAGGCCGTG GCGAACAATC
TCTGCACGAG CGAAACTGCA AGGTGTTAGG CTCCACGATC TGCGGCACAC TCACGCGAGC
GTCGGTGCCG GTGCCGGTCT TGGGCTGCCC ATCATCGGAA AATTGCTTGG ACATACGCAG
GCGAGCACGA CGCAACGCTA CGCTCATCTT GATTCTGATC CTCTGCAGAA GGCATCGAAC
AAGATTGCCG CCAGTATCTC TGCTGCTATG GGTGACGACG CTGGGCATGT TGCGCAGTCG
AGAAACGTTG CGCCAAAATC GTCGGCAATA AGAAAGCCTC GCTGA
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| Protein sequence | MPIKLSKRTV DAIAAGPLPA IQYDVELRGF GVRIGASGSL SWFIEYRPGA GGRRVAKRRY
YFGSREFTPE QARQTAKELL ANVALGGDPM KDRLHERQSL TFSEFAERYL SEEAEPKLKP
GTVANYRIAV RRHANPEIGK LKLHKISNAD LARLHTKIGK TSTVNANRTL ECVSSIFRYA
VTCDIVPVGH NPTKGIRAFR ENRRERFLNS DELARLGSAI REAETVGIPY EIDETKPTSK
HAPKPENRRT KIDSYTAAAL RLLILTGARL REILHLKWDY VDFERGLLLL PDSKTGRKAI
VLNVPALAVL SSLDRKGQYV IFSEQEDKPR ADLNRPWRTI SARAKLQGVR LHDLRHTHAS
VGAGAGLGLP IIGKLLGHTQ ASTTQRYAHL DSDPLQKASN KIAASISAAM GDDAGHVAQS
RNVAPKSSAI RKPR
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