Gene BBta_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1240 
Symbol 
ID5153401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1316169 
End bp1317290 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content54% 
IMG OID640556226 
Producthypothetical protein 
Protein accessionYP_001237386 
Protein GI148252801 
COG category[S] Function unknown 
COG ID[COG4487] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.459037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGCCG TTGAGAAAGC TCGCCATGCA GTCGATCAAC TGGTTGCGGC GAAGCTCAGG 
GAAGGGCGTC AAGCGATTGC TGCGGAAGAG GCGATCAAGG CGAAGGCTGC GGCGGCGGAC
GACCTGCAAT TAAAGCAGAA AGAAGTCAGT GATCTGCAAG TGCTCCTCGC GCAACGCGAT
GAGAAGCTGA AGGAGGCTCA AAAGCTTCAG GCTGAGGTGA TGCGCAAGCA GCGCGAGATC
GACGAAGCCA AGCGCGAACT CGACCTCACA ATTGAGAAGC GAGTGGATGC CTCCATCGCA
GAGATTAGAC AGAAGGCAAA AGCAGAAGCC GAGGAAGGCG AGCGGTTGAA GGTTGCCGAA
AAGGACAATT TAATCTCTTC GCTGCAACGA CAGATCGAAG ACCTCAAGCG CAAGGCTGAG
CAAGGATCGC AGCAACTGCA AGGCGAGGTT CTTGAGCTTG AATTGGAATC AACTCTGCGC
GCGAGTTTCC CGCACGATAC GATTGAGCCC GTCCGCAAAG GAGAATTTGG TGGTGATGTC
GTGCAGCGTG TCTCCACGCC GATTGGACAA ACATGCGGAG CCATGCTGTG GGAAACTAAA
AGAACCAAGA ATTGGGCAGA TGGTTGGCTT TCCAAATTGC GAGCGGATCA ACGCGCTGCT
GGCGCTGAAT TGGCCATCCT CGTATCGACG GCATTGCCAA AAAATGTGGA AACCTTTGGC
TACGTTGATG GTATCTGGGT TACTGATTTT CGTTATGCCG TGCCGCTGGC TTTAGCCTTG
CGACAATCGC TCATCGAGGC TGGTGCGGTG AGGCAGGCTC AGGACGGCCA GAATACCAAG
ATGGAGTTGA TCTATCAGTA TCTGACAGGT CCTAAATTCA GGCATCGAGT TGAGGCAATT
GTCGAGAAGT TTTCCGAAAT GAAGGATGAC CTCGACAAGG AAAGAAAGGC GATGACGCGT
CTATGGGCGA AGCGCGAAGC CCAAATCCGG GGCGTCATCG AATCCACCGT TGGCCTGTAT
GGTGATTTGC AAGGCATTGC TGGTAAGGCT CTTCAAGAGA TCGATGGGCT CGAACTCCCT
CTGATCGAGG CCCAGGTCGA GGTCACTTCG CACATTTCCT AA
 
Protein sequence
MAAVEKARHA VDQLVAAKLR EGRQAIAAEE AIKAKAAAAD DLQLKQKEVS DLQVLLAQRD 
EKLKEAQKLQ AEVMRKQREI DEAKRELDLT IEKRVDASIA EIRQKAKAEA EEGERLKVAE
KDNLISSLQR QIEDLKRKAE QGSQQLQGEV LELELESTLR ASFPHDTIEP VRKGEFGGDV
VQRVSTPIGQ TCGAMLWETK RTKNWADGWL SKLRADQRAA GAELAILVST ALPKNVETFG
YVDGIWVTDF RYAVPLALAL RQSLIEAGAV RQAQDGQNTK MELIYQYLTG PKFRHRVEAI
VEKFSEMKDD LDKERKAMTR LWAKREAQIR GVIESTVGLY GDLQGIAGKA LQEIDGLELP
LIEAQVEVTS HIS