| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1238 |
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| Symbol | |
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| ID | 5153399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1311618 |
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| End bp | 1315013 |
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| Gene Length | 3396 bp |
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| Protein Length | 1131 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640556224 |
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| Product | hypothetical protein |
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| Protein accession | YP_001237384 |
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| Protein GI | 148252799 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCG TGAACTTTGA AATCCTTCGT CCGCGATGGC GCGAGCTCGC AGAGCTTGGC
GGCTTTGCTG AAGCCTACGC GCATGCTGAT CCCGCGAGCG CCATGGTTAA GCTGCGCCTG
TTTGCGGAGA ACCTAACGAA AGACATCTAT CGCGACCTGC GGCTTCCCAA GCCCGACCAG
CCGACTTTTG TCGATCTGCT CAAGAACGCT GCCTTTGCGT CAGTTACGCC CAAAGTCGTG
CTCGACAAGC TGCACGCCCT TCGTATCCAC GGCAACAAGG CTGCTCACGG CGACGATGCC
AGGACGCAGA ACGTACTATG GCTACTCAAG GAAGCGCACG ATCTAGCTCG CTGGCTCCTC
GTCCAGTATG GGAAGGCCAA GGCCAGCGAC ATTCCAGTAT TTAAGCAGCC ACAAGAACCC
CAGGCCGCCG AGACGCGTGA GCGCCGCCAG ATGCTAGAGA GGCTCGCCGC GCAAGAAGCG
CAGATGGAAG CCTTGCTGCG TGAACTCGAT TTGGCGCGAC AGGCGGTCAC GGTCGCGGAA
AAGAAAGCTG CGGAGCTGCA GGCGATTTCG GCGGAGGCGC AAGCGGCGGC TGACGCACTC
GCCTTCGACG AAGCCACAAC GCGTACCCGA CTGATCGACA GCATGCTCGC GAGTGTCGGC
TGGAACGTCG GACCCGGACT AACCAGCACT GAACAAGTCG GCAAGGAGGT TGAAGTCAAG
CATCAGCCAA CCGGCTCCGG TATCGGCTAT GCCGATTATG TGCTCTGGGA CGACAACGGC
AACCCGCTCG CGGTCATCGA GGCAAAAAAG ACTTCCGTCG AACCCGAGCG CGGCCGTCAC
CAAGCGAAGC TCTACGCTGA CGGCCTCGAA AAGGCTTTTG GCCATCGCCC AGTCATTTTC
TACACTAATG GTTTTGACAT CTGGATTTGG GATGATGCGC AGGGCTTCCC ACCTCGCCGT
CTATTCGGGT TTTACTCGAA GGACAGTCTG CAACATCTCG CCAACTACCA ACGCAAGGAA
CGCAAGCCGC TCGATACGGT CGAGCTCAAC GAGCAGATCG TTGACCGTCT TTTTCAGATC
GAGGCTATCA AGCGGGTGGC CGAGCGCTTT GAAGGCAAGC ACCGCAAGGC ACTCGTCGTT
CAGGCAACGG GTACAGGTAA GACTCGTGTT GCAATCGCCC TCACCGATTT GCTGATCCGC
GCAGGATGGG TCAAGCGCGT GCTGTTCCTT TGCGACCGGC GTGAGCTGCG TAAACAGGCT
AAGAATGCCT TCAACGACTT CCTGCCGGAT CCGATCCGGA TTATCACATC GCGCGTGCGC
TCCAACGCGA GCGAGCGCAT TTTCCTGGCC ACCTACCCAG CGATGCAAAA GGTTTTTCAA
TCGTTCGACC CTGGATTTTT TGATCTCATC ATCGCAGACG AATCCCACCG CTCGATATAC
AATGTCTACG GCGACATCTT TCGCCATTTC GACTGCCATC AGATCGGGCT GACCGCAACG
CCCGTCGATT TCGTCACAAA GAGCACCTTC CGGCTCTTTG ATTGCGAAGG CCAATTGCCG
ACAGCGAACT ACGATCTCGA ACAGGCGGTC CAAGACGGCT ATCTAACCCC TTTCGAGGTG
TTCGAGCACA CGACGCAGTT CCTGCGCGAG GGCATTAAAC TGGACATCCT GACCAGGGAG
CAGATCGAGG AGCTTGAAGA GCAGGGCGAA GATCCAGCCC AGTATGATTT TTCCTCTGAG
CAGGTCGATA AGGTCATCTA CAACAAGGAC ACGAACCGCG CGATCCTGCG CAATTTGATG
GAAAATGGCC TTCGCGACGC TACCGGCCAG CTGCCCGGCA AGAGCATCAT TTTCGCGCGC
AACCATCAGC ATGCAATCCT GCTCGCCCAA CTCTTTGACG AGATGTACCC GCAATATGGC
GGCAAGTTCT GCCAGGTCAT AGACAACTAC GATCCGCGCG CAGAGCAACT CATCGACGAC
TTTAAGGGCG AAGGTACTAA CAACGACCTG ACTATTGCGA TTTCCGTGGA CATGTTGGAT
ACCGGCATCG ACATTCCGGA GATCCTCAAC CTTGTCTTTG CGAGGCCGGT CAAATCGCCT
GTCAAGTTCT GGCAGATGGT CGGGCGGGGT ACGCGGCTGT GCAAGGACCT GTTCGGCACC
GGCCAACACA AGACGATCTT TCGCATATTC GATCACTGGG GGAATTTCGA GCGGTTCGAA
GCGGGTTATC GCCCCGCTGA GCCTACGCAA AGCAAATCGC TCCTTCAGCT CGTCTTTGAG
GAACGTCTGC TGCTCGCCCA AGCCGCGCTC CAGAAGAGCG AGATTTCAGT CTTTGACATC
GCCATCGATC TGATCGCCAC TGACATCGAG GCGCTTCCCG AGGAATCAAT CGCGGTGCGC
GAAAAATGGA AGGAGAAGCG AGCGCTCGCG CAGCCGGCCA CATTGAAGAC CTTTGCGCCG
GCCACCGTAG AAAGGCTGCG CCAGGATATC GCGCCGCTGA TGCAGTGGCG CAACATACGC
GGCCGGGCGG ATGCCTACTC GCTCGATCTG TTGATCGCCC GTATCCAGAA CGCTGTCCTA
CGCAAATCAC CGCAGGTCGC AGACCTGAAG ATCGACCTGA TGGACCGTCT TGCCGCATTG
CAGATGCACC TCAATCCCGT GCGCGAGAAG GCCGAGGTCA TCAGGCGCGT GAAGTCGGAT
GAGTTCTGGA ACGGCATCAC CGTCCAAACC CTTGAGGAGG TGCGCGGGCC GCTCCGCGAA
ATCATGCACC ATCGCCAGCG CGGGAGCGGT CAACCGCTCC TGGCTAAAGT CATCGATGTC
ACAGAGGCGG ACTCGCAGAT TCTGTTCAAT CGCCGCTCGG CAAGCCTGAA GGCGGTGGAC
ATGAGGGCTT ACCACCAGAT AGTCGAGGCA GAGCTGAAGA AGCATTTCGA TACGAACCCA
ACGTTGAAAA AGATTCGTGC CGGCGAGCCG GTTTCGGAGG CTGACCTCAA CGCGTTGGTA
TCGCTAATCC TCACACAGAG TCCGAACGCG AGCCGTGATG TCCTGGCCGA ATTCTTCAGC
GCCACGGCGG AGCCCCTTCA ATTTGCAATC CGTTCGATCA TCGGCATGGA CGCAAGTGCG
ATCCAAGCCA AATTTGCCGA ATTCGCGCGC AAGCACCCGA CGCTGAGCGC AAAGCAAACG
CGCTTTCTCG CACTGCTTCA AAACCATATT GCCCGCTTCG GATCGATCAC GATTGAGAAG
CTCTACGAAG CCCCATTTAC GGTCGTCGAT GCGGACGGTC TTGATGGTGT GTTCGAGGAC
GAGACTGAAG TCAGCGACCT CCTCAACGTC ATCCGGGCGT TTGGCCCGTC AGCCGGAGAT
ACCGCGGCAA CTAATCCTAA CGAAAGGTCC GAATAA
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| Protein sequence | MKSVNFEILR PRWRELAELG GFAEAYAHAD PASAMVKLRL FAENLTKDIY RDLRLPKPDQ
PTFVDLLKNA AFASVTPKVV LDKLHALRIH GNKAAHGDDA RTQNVLWLLK EAHDLARWLL
VQYGKAKASD IPVFKQPQEP QAAETRERRQ MLERLAAQEA QMEALLRELD LARQAVTVAE
KKAAELQAIS AEAQAAADAL AFDEATTRTR LIDSMLASVG WNVGPGLTST EQVGKEVEVK
HQPTGSGIGY ADYVLWDDNG NPLAVIEAKK TSVEPERGRH QAKLYADGLE KAFGHRPVIF
YTNGFDIWIW DDAQGFPPRR LFGFYSKDSL QHLANYQRKE RKPLDTVELN EQIVDRLFQI
EAIKRVAERF EGKHRKALVV QATGTGKTRV AIALTDLLIR AGWVKRVLFL CDRRELRKQA
KNAFNDFLPD PIRIITSRVR SNASERIFLA TYPAMQKVFQ SFDPGFFDLI IADESHRSIY
NVYGDIFRHF DCHQIGLTAT PVDFVTKSTF RLFDCEGQLP TANYDLEQAV QDGYLTPFEV
FEHTTQFLRE GIKLDILTRE QIEELEEQGE DPAQYDFSSE QVDKVIYNKD TNRAILRNLM
ENGLRDATGQ LPGKSIIFAR NHQHAILLAQ LFDEMYPQYG GKFCQVIDNY DPRAEQLIDD
FKGEGTNNDL TIAISVDMLD TGIDIPEILN LVFARPVKSP VKFWQMVGRG TRLCKDLFGT
GQHKTIFRIF DHWGNFERFE AGYRPAEPTQ SKSLLQLVFE ERLLLAQAAL QKSEISVFDI
AIDLIATDIE ALPEESIAVR EKWKEKRALA QPATLKTFAP ATVERLRQDI APLMQWRNIR
GRADAYSLDL LIARIQNAVL RKSPQVADLK IDLMDRLAAL QMHLNPVREK AEVIRRVKSD
EFWNGITVQT LEEVRGPLRE IMHHRQRGSG QPLLAKVIDV TEADSQILFN RRSASLKAVD
MRAYHQIVEA ELKKHFDTNP TLKKIRAGEP VSEADLNALV SLILTQSPNA SRDVLAEFFS
ATAEPLQFAI RSIIGMDASA IQAKFAEFAR KHPTLSAKQT RFLALLQNHI ARFGSITIEK
LYEAPFTVVD ADGLDGVFED ETEVSDLLNV IRAFGPSAGD TAATNPNERS E
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