Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1236 |
Symbol | |
ID | 5154671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1310918 |
End bp | 1311442 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640556222 |
Product | putative insertion element protein |
Protein accession | YP_001237382 |
Protein GI | 148252797 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.061183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGGCCGC AGCATCGTAA TCATGTCTGG AGCTACGACT TCGTCGAGGC GCAGACCCAC GATGGGCGCA AGCTGCGGTT GATGACTTTG ATCGACGAGT TCACCCGGGA ATGCCTGGCA ATCAGGGTGG CTCGCCGGAT CAACAGCTTC GGTGTCATCG AGACGATGGC CGACGTAATG CTCGAACGCG GTGTGCCAGA ACACATCCGG TCGGACAACG GCGCGGAGAT GACAGCCAAG GTCGTGCGCA ACTGGTTCGC CAAGCTCGGA GCAAAGACGC TCTACATTGC GCCCGGCAGC CCATGGGAAA ACGGCTACTG CGAGTCCTTC AACGGCAAAC TGCGCGACGA ATGCCTGAAC GGTGAAATCT TTTACAGCCT GAAGGAGGCC ACTGTCGTCA TCGAGCAATG GCGCAAGCAC TTCAACACGA TCCGACCGCA CTCATCGCTG AGCTACCGGC CCCCGGCGCC GCAAACATCG GCGCCGACAC TGCAGCATCT GGATCGGAGC GCAGCGATGC AGTAG
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Protein sequence | MRPQHRNHVW SYDFVEAQTH DGRKLRLMTL IDEFTRECLA IRVARRINSF GVIETMADVM LERGVPEHIR SDNGAEMTAK VVRNWFAKLG AKTLYIAPGS PWENGYCESF NGKLRDECLN GEIFYSLKEA TVVIEQWRKH FNTIRPHSSL SYRPPAPQTS APTLQHLDRS AAMQ
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