Gene BBta_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1236 
Symbol 
ID5154671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1310918 
End bp1311442 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content60% 
IMG OID640556222 
Productputative insertion element protein 
Protein accessionYP_001237382 
Protein GI148252797 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.061183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGCCGC AGCATCGTAA TCATGTCTGG AGCTACGACT TCGTCGAGGC GCAGACCCAC 
GATGGGCGCA AGCTGCGGTT GATGACTTTG ATCGACGAGT TCACCCGGGA ATGCCTGGCA
ATCAGGGTGG CTCGCCGGAT CAACAGCTTC GGTGTCATCG AGACGATGGC CGACGTAATG
CTCGAACGCG GTGTGCCAGA ACACATCCGG TCGGACAACG GCGCGGAGAT GACAGCCAAG
GTCGTGCGCA ACTGGTTCGC CAAGCTCGGA GCAAAGACGC TCTACATTGC GCCCGGCAGC
CCATGGGAAA ACGGCTACTG CGAGTCCTTC AACGGCAAAC TGCGCGACGA ATGCCTGAAC
GGTGAAATCT TTTACAGCCT GAAGGAGGCC ACTGTCGTCA TCGAGCAATG GCGCAAGCAC
TTCAACACGA TCCGACCGCA CTCATCGCTG AGCTACCGGC CCCCGGCGCC GCAAACATCG
GCGCCGACAC TGCAGCATCT GGATCGGAGC GCAGCGATGC AGTAG
 
Protein sequence
MRPQHRNHVW SYDFVEAQTH DGRKLRLMTL IDEFTRECLA IRVARRINSF GVIETMADVM 
LERGVPEHIR SDNGAEMTAK VVRNWFAKLG AKTLYIAPGS PWENGYCESF NGKLRDECLN
GEIFYSLKEA TVVIEQWRKH FNTIRPHSSL SYRPPAPQTS APTLQHLDRS AAMQ