Gene BBta_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1210 
Symbol 
ID5155013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1288751 
End bp1289533 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content68% 
IMG OID640556196 
Productputative 3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001237357 
Protein GI148252772 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.475284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCTCG GGATCAAGGG CCGCCGCGCC ATCGTCTGCG CCTCCAGCAA GGGGCTGGGC 
CGCGCCTGCG CCATCGCGCT CGCCAATGAG GGGGTGCATG TCACGATCAC CGCGCGCGGC
GCCGAGGCGC TGGCCAAGAC TGCAGCCGAC ATTCGCGCGG CCAATCCGGA CATCACCGTG
ACCGAGGTGG CTGGCGACAT CACGACGCCA GAGGGCCGTG CTGCGGTCCT CAAGGCGTGC
CCGGATCCGG ACATATTGAT CAACAATGCC GGCGGCCCGC CGCCCGGCGA CTTCCGCAAC
TGGACGCGCG ATGATTGGAT CAAGGCACTC GATGCCAACA TGCTGACGCC GATCGAACTG
ATCAAGGCGA CCGTCGACGG CATGATGGCG CGCAAGTTCG GCCGCATCGT CAACATCACC
TCGGCCGCGG TGAAGGCGCC GATCGACATT CTCGGCCTCT CCAACGGGGC CCGCGCCGGC
CTCACCGGTT TCGTCGCCGG CCTGTCGCGC AAGACCGTGA TCAACAACGT GACCATCAAC
GCGCTGCTGC CGGGCCCGTT CGAGACCGAC CGCCTGATCG GCACCGCCAA GATCGAGTCC
GAGCGTCGCG GTATTCCGCC CGAGCAGATC CTGGCCGAGC GCGCCAAGAC CAACCCCGCC
GGCCGCTTCG GCGATCCCGA AGAGTTCGGC CTCGCCTGCG CCTTCCTGTG CGGCGCCAAG
GCCGGCTACA TCACGGGGCA GAACATCCTC CTCGACGGCG GTGCCTTCCC CGGCACGCTG
TAG
 
Protein sequence
MDLGIKGRRA IVCASSKGLG RACAIALANE GVHVTITARG AEALAKTAAD IRAANPDITV 
TEVAGDITTP EGRAAVLKAC PDPDILINNA GGPPPGDFRN WTRDDWIKAL DANMLTPIEL
IKATVDGMMA RKFGRIVNIT SAAVKAPIDI LGLSNGARAG LTGFVAGLSR KTVINNVTIN
ALLPGPFETD RLIGTAKIES ERRGIPPEQI LAERAKTNPA GRFGDPEEFG LACAFLCGAK
AGYITGQNIL LDGGAFPGTL