Gene BBta_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1201 
Symbol 
ID5155134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1280218 
End bp1281522 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content66% 
IMG OID640556187 
Producthypothetical protein 
Protein accessionYP_001237348 
Protein GI148252763 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4091] Predicted homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.259827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCC ACTCCCTCCT CCAAGCCCGC CACGCCTCCG GCCAACCTGT CCGCGTCGCG 
CTGATCGGCG CCGGCAAATT CGGCTCGATG TTCCTGTCGC AGGTGCCGCA TGTGGTCGGC
CTCGAGGTGC CTGTGATCAT CGATCTCGAT CCGGAGCGAG CGCGCGACGC TTGCCGGACG
ATCGGCTGGA GCGCGGAGCT AATTGAGCGC ACGGCATTCA GTGTTGATGG CGCGAAGGCG
CTGGCTGACA ACATCGATGT CGTCGTTGAA GCCACCGGCA GTCCGGCCGC CGGCATCCGC
CACGCGCGCG CGGCGATCCG TGCCGGCAAG CACATCGTGA TGGTCAACGT CGAAGCCGAC
GTGCTGGCGG GACCGCTGTT GGCTGACGAG GCGCGCAAAG CCGGCGTGGT CTATTCGCTC
GCTTATGGCG ACCAGCCGGC GCTGACGGCG GAGCTCGTCG ATTGGGCGCG CGCCACCGGC
TTCCATGTCG TGGCGGCCGG CAAGGGCACG AAATATCTGC CGGCCTATCA CGACGTGACG
CCCGACGGCG TCTGGCAGCA TTACGGGCTC ACGGCCGGCG AGGCACAGTC CGCCGGCATG
AATCCGCAGA TGTTCAACTC CTTCCTCGAC GGCACCAAGT CGGCGATCGA GATGGCGGCG
ATCGCCAACG CGACCGGGCT CGATGTTCCG AACGATGGCC TGTTGTTCCC GCCTTGCGGC
GTCGACGACC TACCGCATGT GCTGCGGCCG CGCGAGCGCG GCGGTGTGCT GGAACGCTCG
GGCATGGTCG AGGTGGTGTC GTCGCTGGAA CGCGACGGCC GCCCCGTGTT TCGCGATCTG
CGCTGGGGCG TCTATGTCGT GCTGGAAGCG CCGAACGACT ACGCCGCGGA TTGCTTCCGG
CAATACGGCC TGAAGACCGA CACCAGCGGA CGCTATGCGG CGATGTACAA GCCCTATCAT
CTGATCGGAC TTGAGCTGAA CGTCTCGGTG CTATCAGCAG CGCTACGCAA GGAACCGACC
GGCCAGCCGC GCGGTTTCCG CGGCGATGTC GTCGCGGTCG CCAAGAAGAC GCTGCGCGCC
GGCGAGATGC TCGACGGCGA AGGTGGCTAT ACCGTCTGGG GCAAGGTGTT CCCGGCTGCG
ACAAGTCTTC AGCTCGGCGC GCTGCCGATC GGATTGGCGC ATCGCGTGAA GCTGACCCGG
GACGTCGCGC ATGGCGAGGT CGTGCGCTGG AGCGATGTCG CCATCGACAC CGCCGATGAG
ACGGTCAGTG TTCGAAAGCA GATGGAGGCG GTATTCGCGC GCTGA
 
Protein sequence
MNLHSLLQAR HASGQPVRVA LIGAGKFGSM FLSQVPHVVG LEVPVIIDLD PERARDACRT 
IGWSAELIER TAFSVDGAKA LADNIDVVVE ATGSPAAGIR HARAAIRAGK HIVMVNVEAD
VLAGPLLADE ARKAGVVYSL AYGDQPALTA ELVDWARATG FHVVAAGKGT KYLPAYHDVT
PDGVWQHYGL TAGEAQSAGM NPQMFNSFLD GTKSAIEMAA IANATGLDVP NDGLLFPPCG
VDDLPHVLRP RERGGVLERS GMVEVVSSLE RDGRPVFRDL RWGVYVVLEA PNDYAADCFR
QYGLKTDTSG RYAAMYKPYH LIGLELNVSV LSAALRKEPT GQPRGFRGDV VAVAKKTLRA
GEMLDGEGGY TVWGKVFPAA TSLQLGALPI GLAHRVKLTR DVAHGEVVRW SDVAIDTADE
TVSVRKQMEA VFAR