| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1180 |
|---|
| Symbol | |
|---|
| ID | 5154933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1254848 |
|---|
| End bp | 1255438 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640556166 |
|---|
| Product | putative cation transport protein chaC-related |
|---|
| Protein accession | YP_001237333 |
|---|
| Protein GI | 148252748 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3703] Uncharacterized protein involved in cation transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGT CCGATCGTGA TCTTCCCAAC GGCGACCTCT GGGTGTTCGG CTATGGCTCG
CTGATGTGGC GGCCCGGTTT CGAGTTCCTC GAGCAAGTGC CGGCGCGGCT GATCGGCGAG
CACCGCGCGC TGTGTGTCTA TTCGTTTGTC CACCGCGGAA CGCCGGAAAA GCCGGGCCTC
GTGCTCGGCC TTGATCGCGG TGGCGCGTGC CGCGGGATTG CGTTCCGGGT CGCGGAAACC
AGGCGCGACG AGACGATCGC CTATTTGCGC GCGCGCGAGC AGGTGACCTC GGTGTATCGC
GAGGTGACGC GCTCGGTGTG GCTGGAGAAC GAAGCAAGGC AGCGCGTCAG CGCGCTGGTC
TATGTCGTCG ACCGCGGCCA TGTCCAATAT GCCGGCCGGC TGTCGCTGCA GGAGCAGTTG
CGCCATGTCC GCCAGGGCCA TGGCCAGTCC GGCGCCAACC GCGACTATGT GCTCTCGACC
GTGAAGGCGA TCGAGGCCCA GGGCTTTCGC GATACGCAGC TGCACCGGCT GGCCATGATG
CTGCATGACG ACGGCCACTC GCGGCATCCG GCGCCGGGCG ACTCGCCGTA G
|
|---|
| Protein sequence | MTLSDRDLPN GDLWVFGYGS LMWRPGFEFL EQVPARLIGE HRALCVYSFV HRGTPEKPGL
VLGLDRGGAC RGIAFRVAET RRDETIAYLR AREQVTSVYR EVTRSVWLEN EARQRVSALV
YVVDRGHVQY AGRLSLQEQL RHVRQGHGQS GANRDYVLST VKAIEAQGFR DTQLHRLAMM
LHDDGHSRHP APGDSP
|
|---|
| |