| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1171 |
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| Symbol | |
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| ID | 5153634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1247153 |
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| End bp | 1247812 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640556158 |
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| Product | SDR family dehydrogenase |
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| Protein accession | YP_001237325 |
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| Protein GI | 148252740 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.541454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGCA CCAGCTCCGG CATCGGCCGT GCCATTGCCG AGCGCCTGCT CGCGGGCGGC
TGGCATGTGA CGGGCATCGA CCGCGCGCTG CCGGACTGGA CGCATGCCGG CTTCGTCGGC
CAGCAGGCTG ATCTGGCGGA GCCGCACGCG CTGATCGCGC AGCTTGCGGA CCTCGGCACG
GTGACCGCGC TCGTTCATGC CGCCGGCTAC ATGCGTGTCG GCCGGCTCGG CGAGCTCATG
CCTGACAGCG GCGAGGGCAT GTGGCAAGTC CATGTCGGTG CCGCGGAGGC GCTGGCCAAT
GCGCTGGCGC CTGATATGGG CGAGGGCGGA CGCATCGTGC TGATCGGCAG CCGCACCGCC
AATGGCGCTG CCGGCCGCAG CCAATATGCG GCCACCAAAG CCGCACTCAC CGGCCTTGCG
CGGTCCTGGG CGATCGAGCT CGCGCCGCGC CGGATCACCG TGAACGTGAT CGCCCCCGCC
GCCACCGACA CGCCGTTCCT GCGCGATCCC AGCCGCGCCG GCACCGCGCC GGTGCTGCCG
CCGATGGGCC GCTTCGTCGA TCCCGCCGAG GTCGCCGCGC TCACCGCCTT TCTGCTGTCC
CCGGAGGCGA GCGCGATCAC CGGACAGACC ATCACCATCT GCGCAGGTGC CTCCCTCTGA
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| Protein sequence | MTGTSSGIGR AIAERLLAGG WHVTGIDRAL PDWTHAGFVG QQADLAEPHA LIAQLADLGT
VTALVHAAGY MRVGRLGELM PDSGEGMWQV HVGAAEALAN ALAPDMGEGG RIVLIGSRTA
NGAAGRSQYA ATKAALTGLA RSWAIELAPR RITVNVIAPA ATDTPFLRDP SRAGTAPVLP
PMGRFVDPAE VAALTAFLLS PEASAITGQT ITICAGASL
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