Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1166 |
Symbol | |
ID | 5154396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1242499 |
End bp | 1243314 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640556153 |
Product | IclR family transcriptional regulator |
Protein accession | YP_001237320 |
Protein GI | 148252735 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGAGG ACAGCAAGGC TGGCAAAAGC GTCGTGCAGT CGCTGGCCAA GGGTTTTCAC GTGCTCAACG CGTTCACCAG CGAGGAGCCG GAGCTCGTGC TCGCCGACGT CGCGCGCCGC GCCGCGCTCG ACAAGGGCAC CACCTTCCGC CTGCTCAACA CGCTGGTGAT GCTCGGCTAT GTCGAGAAGG TCGGTGACAC CAGACGCTTC CGCCTGACGC TGAAATGTCT CGACCTCGGC TTCAACGCGA TCGCACGCTC AGAGCTGCGC GATCAGGCGC GTCCGATCCT GCGCAGCCTG GTTGGTGAGA TGAACGAGGC GGCCTCGCTC GCGGTGCTCG ACGGCAGCGA CATCGTCTAT GTCGAGCGCA TCCAGGCCGG CCTTGTCCGG CTCGGGGTTG ACGTCCGCAT CGGCAGCCGC GCGCCGGTCT ATTCCACTGC CGTCGGTCAG GCGCTTCTGT CGCTGCTGCC GGTGGAGACG CAGGTCGCCG TGCTCGAGGC GCAGCCGCGC ATCAAGCGGA CCGAGACCAC GATCACCGAT CTCGACGCGC TGCTGCAGCG CCTGCGTCAG GTGAAGGCCG CCGGCTACGC ACTGTCCAAT CAGGAGAATG CGCCGGGGCT GTGCGTGCTC GCCGCGCCCG TGATCGATCG TGACGGCGTG CCGCTCGCCG CCATCAGCGT CGCCGCGCCG ACCATGCGCA TATCGGCCGA GGCGTTCGAG CGCATGGGCG TGGCGCCTTT GCTCCGCGCT GCGGCCCAGC TGTCGCGCGC GCTCGAAGCG ATGGGCGGCG CCGTCGCGAC CGTCTCGAAC CGATGA
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Protein sequence | MDEDSKAGKS VVQSLAKGFH VLNAFTSEEP ELVLADVARR AALDKGTTFR LLNTLVMLGY VEKVGDTRRF RLTLKCLDLG FNAIARSELR DQARPILRSL VGEMNEAASL AVLDGSDIVY VERIQAGLVR LGVDVRIGSR APVYSTAVGQ ALLSLLPVET QVAVLEAQPR IKRTETTITD LDALLQRLRQ VKAAGYALSN QENAPGLCVL AAPVIDRDGV PLAAISVAAP TMRISAEAFE RMGVAPLLRA AAQLSRALEA MGGAVATVSN R
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