Gene BBta_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1166 
Symbol 
ID5154396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1242499 
End bp1243314 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content69% 
IMG OID640556153 
ProductIclR family transcriptional regulator 
Protein accessionYP_001237320 
Protein GI148252735 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGAGG ACAGCAAGGC TGGCAAAAGC GTCGTGCAGT CGCTGGCCAA GGGTTTTCAC 
GTGCTCAACG CGTTCACCAG CGAGGAGCCG GAGCTCGTGC TCGCCGACGT CGCGCGCCGC
GCCGCGCTCG ACAAGGGCAC CACCTTCCGC CTGCTCAACA CGCTGGTGAT GCTCGGCTAT
GTCGAGAAGG TCGGTGACAC CAGACGCTTC CGCCTGACGC TGAAATGTCT CGACCTCGGC
TTCAACGCGA TCGCACGCTC AGAGCTGCGC GATCAGGCGC GTCCGATCCT GCGCAGCCTG
GTTGGTGAGA TGAACGAGGC GGCCTCGCTC GCGGTGCTCG ACGGCAGCGA CATCGTCTAT
GTCGAGCGCA TCCAGGCCGG CCTTGTCCGG CTCGGGGTTG ACGTCCGCAT CGGCAGCCGC
GCGCCGGTCT ATTCCACTGC CGTCGGTCAG GCGCTTCTGT CGCTGCTGCC GGTGGAGACG
CAGGTCGCCG TGCTCGAGGC GCAGCCGCGC ATCAAGCGGA CCGAGACCAC GATCACCGAT
CTCGACGCGC TGCTGCAGCG CCTGCGTCAG GTGAAGGCCG CCGGCTACGC ACTGTCCAAT
CAGGAGAATG CGCCGGGGCT GTGCGTGCTC GCCGCGCCCG TGATCGATCG TGACGGCGTG
CCGCTCGCCG CCATCAGCGT CGCCGCGCCG ACCATGCGCA TATCGGCCGA GGCGTTCGAG
CGCATGGGCG TGGCGCCTTT GCTCCGCGCT GCGGCCCAGC TGTCGCGCGC GCTCGAAGCG
ATGGGCGGCG CCGTCGCGAC CGTCTCGAAC CGATGA
 
Protein sequence
MDEDSKAGKS VVQSLAKGFH VLNAFTSEEP ELVLADVARR AALDKGTTFR LLNTLVMLGY 
VEKVGDTRRF RLTLKCLDLG FNAIARSELR DQARPILRSL VGEMNEAASL AVLDGSDIVY
VERIQAGLVR LGVDVRIGSR APVYSTAVGQ ALLSLLPVET QVAVLEAQPR IKRTETTITD
LDALLQRLRQ VKAAGYALSN QENAPGLCVL AAPVIDRDGV PLAAISVAAP TMRISAEAFE
RMGVAPLLRA AAQLSRALEA MGGAVATVSN R