Gene BBta_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1158 
Symbol 
ID5153853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1229626 
End bp1232541 
Gene Length2916 bp 
Protein Length971 aa 
Translation table11 
GC content54% 
IMG OID640556146 
Producthypothetical protein 
Protein accessionYP_001237313 
Protein GI148252728 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0746072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAAG CGGTTCCATT TCAGACACGC GCACGCACGA TCGACCACCT TGGACGGGGC 
CAAATCGCCG ACGCTCCGAC CGCAGTCAGC GAACTTTGGA AGAATGCCTA CGATGCCTAC
GCGAAAAACG TAGCTCTCCA TATTTTTGGT GGAAGCCCGG AAGTAGCAGC TGTTTTCGAT
GACGGAATCG GAATGAGCCG CGAGGATGTA ATACAACGCT GGCTCGTAAT CGGAACAGAG
AGCAAGTTTG ACAATGCGGA TACGACGCCA CCCGAGACGT TCGGTCTGCC GCCTCGCCCG
CGACAAGGCG AGAAGGGCAT TGGGCGTCTC TCCGTTGCCT TTCTTGCACC AGGAACCATC
CTCATCACTA AGCGGGCCAA CTCCGAATTC GTTGTTGTCG TAGTCGACTG GCGTCTGTTC
GAAAATCCCT TTGTCGCGTT GGACGATATC CAGCTTCCCG TCGAAACCTT TCCGAACGCC
GACGCATTGG CAAATGGACT ACCCACACTC TTGGATACAC TTAAGTCCAA TCTCGGAAAT
GCGTCCGACG ACCGCGGCAA GCGACTCGCC GATAGCTGGG GACGATTTTC TGATTACGAG
AAGGAGAAAG GCTTTTCTTC AACCCTTGAG GCGATCAAGT CGTCATGGGT CAAAATGCCG
TTGACAAAGC GGCATCTGGA GGAGTGGCCA GTCTTTTTGG ATCTGGTCGA CCACGGCACC
GCAATGTTCA TGATCTCGCT CAACAACGAG TTGGGCGTCT GGGTGCGCCC AGCCGAAACG
GGTGAGGAAG TTGAAGCAGT CAAGCGGCGC CTCAAGCAAA CACTTACCGC ATTTACCGAC
CCTTACTCGG AAGCGCCTCC ACAGTTCGAC TATGAAGTCT ACCTTCATCG CGGCAACGGC
GACGAAAGAG TGATAGGAGC CTCCGAAGTC TTCGGCATCG ACGCGCTTCA CGATCTTGAG
CACTACATTG ACGGCCGCTT TGACGAAAAA GGTACATTTA CGGGACAGGT CGTTGCATTT
GGAAAAGACC TTGGTACGCG GACATTCACA CCGGCTCGCG CGCTTCCGAC TAAGGGGCGC
GATCGTTTAG GACCCTTTAC GTTTGCAATT GGGACTTTTG AATTTGACGA GCGCAGGTCT
ACTCACGACG AGAACCAGCA TGCGCATCTT ATGGAACAAG CCAAAAACTC TTCCGGTATC
TTTGTCTATC GCGACCTCTT GCGCGTCATG CCCTATGGAC GTCCGGACGC AGATTTTCTG
CAGCTAGAAG AACGCCGAAG CATGCATGCC GGACGCGAAT TCTGGGCGCA TCGACGAAGC
TTTGGCCGTA TTGGCTTTAC GCGAGCAGAT AACCCGGCCC TTAAAGACAA GGCCGGTCGC
GAAGGACTGG TCGACAATCG TGCCTTCCGC GAAATGTGCC TTCTGGTTAT TGACTTTTTG
ATGGATGCCG CACGCAAGTA TTACGGAACG GATGCGCCTC TCCGAGAAGA GCTGTTGCCG
GGCATTATGG AACGCAAAGC GCTTCAGAAA GAAGCTGCTG ATAAAGCGCG AGCGCGACGC
CGTAGGGGCA TGAGGCAGTT TCTGAGGGAG CAATCCTCAC CTTTGGAGGA TGCTCTCCAA
CGAGCCGAAT CGTTGATGGC GCTTGCAAAG GACACTCTGA CGAAGAACGA TAAGGTGCAG
GCAACCGTCT TGGCGGCCCG GGTGCGCGAC ATTCGCGCTC TCGGCGAGAC CCTGCGGCCA
CCGACGCCGC CTTCAAGGCT TGGTGATCTT GAGGTCGAAT GGCGCACCTA TCGTGATAAT
TATAACGCGT TTCTCGGCAA ACTCAAGACG GTCGCAGGAC TTGCTGCCGA AGTTGAAACT
GCAATGGAGG CAGAAAAGCC AAAAGACGTT TTGGCGTCGC ACTACGGTGA GCAACGTGAG
ATTCTAGTCA ATCAGCTCAA AGATTTTTCG GTCTCAATCG ACGAGCGACT AAAGCGGCTT
CGGTTAAAAT GGCAAGACCA ACAAAAGGCC GACGAAGCTG AAATAGAGAA TCGCATAGGT
TACTTGCTTG AAACCAAAGT GAACGCTGCC AATCTTTTGG CGATGTTGAA TCTGATCGAC
ACGAACCGAG CTGAATTGTC CGACGTCTTC GCCGCACGAT ATCAATCATT CATCGGTGCG
CTCGATCAAT TGATCGAAGG TATCGATCTG CAAGGCGCGG TCGACATTGT TAACGAACGG
CAAGAGGAAC TTGAAGAGCA GCTTCGGGAT ATTCGCGCCG TCGCGCAGAT TGGGATAACC
GTTGAAATCA TCGGTCATGA GTTCGAGACG CTGGAATCTG AAGTCAGACG TAACCTGGGA
AAACTTCCGT CAGACGTTCG CGAGACCGCG TCATACAAGC AGGCACTTCG CTCGCATCAG
GCTCTCGCTG ATCGACTCCG GTTTCTCGCG CCCTTGAAGA TCGGTGGATA TCGTACGCGC
GAAACGATAT CCGGACAACA GATTGCCGAT TACATTTCGG AATTCTTCTC CAAGATGTTC
CTGGATCAGC GGATCGATTT TCTGGCTACT GCGGCGTTCA GAAGAATCTC GATTGTGGAC
ATTCCGTCTC GGATCTTCCC GGTTTTCATC AACCTCATCA ATAATTCAGT TTATTGGGTC
AGCCAGTCGG CGGAGCGCTA CATTCGTCTC GATTTCAAGA ACGGCCTCAC CGTCGTTGCT
GATAGCGGCA AAGGCGTCGA TCCCGAAGAT GTTCCTCGGC TATTCAACAT CTTCTTCACC
CGTCGCCGTT CGGGTCGGGG CGTCGGCCTC TATCTCAGTC GCGCAAACCT TGCCGTCGCG
GGGCATAAGA TCAGATATGC AACCAACGCC GATCCCCACA TACTCGAGGG CGCGAATTTC
ATAATTGACT TTAAAGGTGT GCGAACCGAT GCCTGA
 
Protein sequence
MIQAVPFQTR ARTIDHLGRG QIADAPTAVS ELWKNAYDAY AKNVALHIFG GSPEVAAVFD 
DGIGMSREDV IQRWLVIGTE SKFDNADTTP PETFGLPPRP RQGEKGIGRL SVAFLAPGTI
LITKRANSEF VVVVVDWRLF ENPFVALDDI QLPVETFPNA DALANGLPTL LDTLKSNLGN
ASDDRGKRLA DSWGRFSDYE KEKGFSSTLE AIKSSWVKMP LTKRHLEEWP VFLDLVDHGT
AMFMISLNNE LGVWVRPAET GEEVEAVKRR LKQTLTAFTD PYSEAPPQFD YEVYLHRGNG
DERVIGASEV FGIDALHDLE HYIDGRFDEK GTFTGQVVAF GKDLGTRTFT PARALPTKGR
DRLGPFTFAI GTFEFDERRS THDENQHAHL MEQAKNSSGI FVYRDLLRVM PYGRPDADFL
QLEERRSMHA GREFWAHRRS FGRIGFTRAD NPALKDKAGR EGLVDNRAFR EMCLLVIDFL
MDAARKYYGT DAPLREELLP GIMERKALQK EAADKARARR RRGMRQFLRE QSSPLEDALQ
RAESLMALAK DTLTKNDKVQ ATVLAARVRD IRALGETLRP PTPPSRLGDL EVEWRTYRDN
YNAFLGKLKT VAGLAAEVET AMEAEKPKDV LASHYGEQRE ILVNQLKDFS VSIDERLKRL
RLKWQDQQKA DEAEIENRIG YLLETKVNAA NLLAMLNLID TNRAELSDVF AARYQSFIGA
LDQLIEGIDL QGAVDIVNER QEELEEQLRD IRAVAQIGIT VEIIGHEFET LESEVRRNLG
KLPSDVRETA SYKQALRSHQ ALADRLRFLA PLKIGGYRTR ETISGQQIAD YISEFFSKMF
LDQRIDFLAT AAFRRISIVD IPSRIFPVFI NLINNSVYWV SQSAERYIRL DFKNGLTVVA
DSGKGVDPED VPRLFNIFFT RRRSGRGVGL YLSRANLAVA GHKIRYATNA DPHILEGANF
IIDFKGVRTD A