| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1156 |
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| Symbol | vsr |
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| ID | 5152477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1227382 |
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| End bp | 1227825 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640556144 |
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| Product | T/G mismatch-specific endonuclease |
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| Protein accession | YP_001237311 |
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| Protein GI | 148252726 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
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| TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.505674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGGATC GGCTTACTTC GTCTCAGCGC AGCGCGGTGA TGGCGCGCAT CCAGGGGAAG
GATACAACGC CTGAAATGCG CGTAAGAACG ATCGCCCACG CGATGGGACT TCGTTTTCGT
CTGCATCGCG GTGATTTGAA GGGGACACCT GATCTGGTGT TCCCTAAGCA CAAGACGGCG
TTGTTCGTTC ACGGATGCTT CTGGCATCGG CATCCGGGCT GTAAGCGTGC GTCCATGCCT
CAAACTCGCG AAGAGTTCTG GCGCAAAAAG CTAGCGCAAA ACGTAGCGCG AGATGCGGAA
GCGACATTAC AGCTTAGCTC GGAAGGTTGG CGTGTTCAAA TCATATGGGA ATGTGAAACC
AAAGACCCGG CCCAGATCCG AAAACGTCTT GAGAAGATGT TCAAAGCGTC CATCGGAAGA
CGACGCAAAA AGGACAGAAA GTAG
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| Protein sequence | MMDRLTSSQR SAVMARIQGK DTTPEMRVRT IAHAMGLRFR LHRGDLKGTP DLVFPKHKTA
LFVHGCFWHR HPGCKRASMP QTREEFWRKK LAQNVARDAE ATLQLSSEGW RVQIIWECET
KDPAQIRKRL EKMFKASIGR RRKKDRK
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