| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1144 |
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| Symbol | tlpA |
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| ID | 5153576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1217573 |
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| End bp | 1218262 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640556132 |
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| Product | Thiol disulfide interchange protein tlpA (cytochrome c biogenesis protein tlpA) |
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| Protein accession | YP_001237299 |
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| Protein GI | 148252714 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.243856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAACG ATAAGCCAGA GCCGTCCCCT GCCCGCCCCG CTGGATCGCG GAAAACGCTG
CTGGCCGCAG CCGCCATCAC GGTGGTCGCC GTCGCCGGTG TGGCGGCCAT GGCGTTTGGC
GGGCTGCTGA AGGGCCGTCC GGCGGGCGAC CAGGCCTGCG AAGCGGCGGT CGCGACAGCC
AAGCGGATCG CGCCGCTGAT CAAGGGCGAG GTCGCGGCGC TGACGCCGGC CTCCGCGCCG
CTGCGGTTGC CGGATCTCGC TTTCGAGGAT GGGACGGGCG CGCCGAAGAA ACTGTCCGAC
TTCCGCGGCA GGACGGTGCT ATTGAACCTG TGGGCGACCT GGTGCGTGCC GTGCCGCAAG
GAGATGCCGG CGCTGGACGG GCTGCAGGCC AAGCTCGGCA GCGACGCCTT CCAGGTGGTC
GCGGTCAACA TCGACACCCG CGACCCGGAG AAGCCGAAGG CCTTCCTGAC CGAGGCCAAG
CTGACGCAGC TGGCCTATTT CAGCGACCAG AAGGCCAAGG TGTTCCAGGA CCTGAAGGCG
GTGGGCCGCG CCTTGGGCAT GCCAACCTCG GTGCTGGTCG ACGGCCATGG CTGCGAGATC
GCGACCATCG CAGGCCCCGC CGAATGGGAC AGCGCCGATG CGGTCAAGCT GATCCAGGCC
ATCACGGCGA AGGCGGCGGC AGGACTCTGA
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| Protein sequence | MTNDKPEPSP ARPAGSRKTL LAAAAITVVA VAGVAAMAFG GLLKGRPAGD QACEAAVATA
KRIAPLIKGE VAALTPASAP LRLPDLAFED GTGAPKKLSD FRGRTVLLNL WATWCVPCRK
EMPALDGLQA KLGSDAFQVV AVNIDTRDPE KPKAFLTEAK LTQLAYFSDQ KAKVFQDLKA
VGRALGMPTS VLVDGHGCEI ATIAGPAEWD SADAVKLIQA ITAKAAAGL
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