Gene BBta_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1134 
Symbol 
ID5153480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1209350 
End bp1210003 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content71% 
IMG OID640556122 
Productputative DNA-3-methyladenine glycosidase 
Protein accessionYP_001237289 
Protein GI148252704 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.983538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC ACCTCGACAG CCAGGATGTC CTCGAGGACG CGGTCCGCAC GCTGGTGACG 
CAGGACAAGC GGCTGGCGCC GATCCTGGCC GCAACCGGCA TGCCGGCGCT GCGGCGGCGG
GAGCCGGGCT TTGCCGGCAT CGCCCACATC GTCTGCGGCC AGCAACTGTC GACCGCGAGC
GCGGCGGCGA TATGGGGCCG ACTGCAGGCG GCGTTCGACC CATTCGATCC CGACGCGATC
CGCCGCGCCC GCGCCGACCG GCTGGGACGG CTCGGCCTCT CCGCCGCCAA GATCAAGACG
CTCAAGCACA TCGCGCGCGA ACTCGGCGCC GGGCGGCTCA ATCTCGACGT GCTCGCCAAT
GAGGACGCCG ATGCCGCACA CGCGACGCTG ACCGCCCTGC CCGGCATCGG GCCCTGGACG
GCGGACGTGT ATCTCTTGTT CTGCCTGGGG CATGGCGATG CCTGGCCGGC CGGCGATCTG
GCGGTGCAGG AAGCGGTGAA GGTCGGGCTG GGCCTGGCAA CACGCCCGAC CGCCAAGCAG
ATAATGCCGC TGGCGGAAGG CTGGCGACCG CTGCGCGGCG CGGCCGCGCA TCTGTGGTGG
AGCTATTACC GCGTGCTCAA GAAGCGGGAG GGCATCATCG CGCCGGCCAA CTAA
 
Protein sequence
MTLHLDSQDV LEDAVRTLVT QDKRLAPILA ATGMPALRRR EPGFAGIAHI VCGQQLSTAS 
AAAIWGRLQA AFDPFDPDAI RRARADRLGR LGLSAAKIKT LKHIARELGA GRLNLDVLAN
EDADAAHATL TALPGIGPWT ADVYLLFCLG HGDAWPAGDL AVQEAVKVGL GLATRPTAKQ
IMPLAEGWRP LRGAAAHLWW SYYRVLKKRE GIIAPAN