Gene BBta_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1131 
Symbol 
ID5153389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1206339 
End bp1206896 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content60% 
IMG OID640556119 
Productputative HNH endonuclease 
Protein accessionYP_001237286 
Protein GI148252701 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGCAC ATGTCTCGCA AGGCGGTTGG CCGGTGTTGG TGCTGAACGC GGACTTCCGG 
CCGCTGAGTT ACTACCCGCT GTCTCTCTGG TCGTGGCAAG ACGCGATCAA GGCGGTGTTC
CTCGATCGCG TCAACATTGT CGAGTACTAC GACAGGGCGA TCCGAAGTCC ATCCTTTGAG
ATCCAGCTGC CAAGCGTCGT TTCGCTAAAA TCCTTCGTCA AACCGACGAC GCATCCGGCC
TTCACCCGCT TCAACGTCTT TCTGCGCGAC CGCTTCGTCT GCCAATACTG CCACTCCGGC
GACGACCTCA CCTTCGACCA CGTCATTCCG CGCAGCAAGG GTGGCCAGAC CACCTGGGAA
AACGTCGTCG CCGCCTGCTC GCCCTGTAAC CTGAAGAAGG GCAATCTGAC GCCGCAGCAG
GCCAAGATGT TTCCCAAGCA GGCGCCCTAC GCGCCGACCG TCCACCAGCT CCATCGCAAC
GGCCGGCTGT TTCCGCCGAA CTACCTGCAC GACAGCTGGC TCGATTATCT GTATTGGGAT
ACCGAGCTCG ATCCGTAG
 
Protein sequence
MNAHVSQGGW PVLVLNADFR PLSYYPLSLW SWQDAIKAVF LDRVNIVEYY DRAIRSPSFE 
IQLPSVVSLK SFVKPTTHPA FTRFNVFLRD RFVCQYCHSG DDLTFDHVIP RSKGGQTTWE
NVVAACSPCN LKKGNLTPQQ AKMFPKQAPY APTVHQLHRN GRLFPPNYLH DSWLDYLYWD
TELDP