Gene BBta_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1119 
Symbol 
ID5149481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1190950 
End bp1191996 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content67% 
IMG OID640556107 
Productalpha/beta family hydrolase 
Protein accessionYP_001237274 
Protein GI148252689 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACAC CCTTTCACCA GAGCCGACGC CATTTTCTGA CCTTGGCAGG AACCGCCGTT 
GCGGCCGCTC AACTTGGATC CGGCGCGGTG GCCGCGGAGC GCGTCAAGAA CGCGCCGTCG
CTGCCGGCGA TCAGGCCCGG GGCGACGACG CTGGGCCCGA TCAAGCAAGT CACTGCAAGC
GAGATCAGCA TCGGCTATGC GGAAGCTGGT CCGTCCGATG GCGCCGTCGT GATCCTGCTG
CACGGCTGGC CGTATGACAT CCACAGCTTC GCCGACGTCG CGCCGGCGCT GGCCGCCGCC
GGCCAGCGCG TGATTGTTCC TTATCTGCGC GGCTACGGCT CGACGCGGCT GCTGGGGGCG
GCCGCCTTGC GCAGCGGCCA GCCGGTGGCG GTCGCCGCCG ACATCGTCGC TTTGATGGAT
GCGCTCAATA TCAGGACGGC GACGCTGGCC GGCTTTGATT GGGGCGCGCG CACCGCGAAC
ATCGTCGCGG CGCTGTGGCC CGAGCGGTGC AAGGCCATGG TCTCGGTCAG TGGCTATCTC
ATCGGCAGCC AGCAGGCCGG CCGCATGCCG CTGCCGCCGG CCGCCGAGCT GCAATGGTGG
TATCAGTTCT ACTTCGCGAC CGAACGCGGC CGCGAGGGCT ATGACAGGAA TCGTCGCGAC
TTTGCCAGGC TGATCTGGCA GACGGCTTCG CCGAAATGGG CGTTCGACGA GGCGACCTTC
GCCCGCAGCG CCGCGGCCTT CGACAATCCC GATCACGTCG ATATCGTGGT ACACAATTAT
CGCTGGCGGC TCGGCCTCGC GCAGGGAGAG GCGAAGTATG ATGCGCTCGA AGCGAGGCTG
GGGGCATTTC CTGAGATCGC CGTGCCGACC ATCACGATGG AAGGCGACGC CAACGGCGCG
CCGCATCCTG CGCCGGAGAC CTATGCCAAG AAGTTCACCG GCCGCTATGA GCATCGCCTG
GTCAGCGGCG GCATCGGCCA CAACCTGCCC CAGGAGGCGC CACAGGCCTT TGCGCAGGCG
GTGATTGACG TCACGGCGGG GGCATAG
 
Protein sequence
MPTPFHQSRR HFLTLAGTAV AAAQLGSGAV AAERVKNAPS LPAIRPGATT LGPIKQVTAS 
EISIGYAEAG PSDGAVVILL HGWPYDIHSF ADVAPALAAA GQRVIVPYLR GYGSTRLLGA
AALRSGQPVA VAADIVALMD ALNIRTATLA GFDWGARTAN IVAALWPERC KAMVSVSGYL
IGSQQAGRMP LPPAAELQWW YQFYFATERG REGYDRNRRD FARLIWQTAS PKWAFDEATF
ARSAAAFDNP DHVDIVVHNY RWRLGLAQGE AKYDALEARL GAFPEIAVPT ITMEGDANGA
PHPAPETYAK KFTGRYEHRL VSGGIGHNLP QEAPQAFAQA VIDVTAGA