Gene BBta_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1117 
Symbol 
ID5149479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1188920 
End bp1189090 
Gene Length171 bp 
Protein Length56 aa 
Translation table11 
GC content51% 
IMG OID640556105 
Productputative Flp/Fap pilin component 
Protein accessionYP_001237272 
Protein GI148252687 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.522901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAT TATTGCTCAA ATTTTACGAA GATGAATCAG GCGCAACGGC GATTGAATAC 
GGGCTGATCG CCGCCGGCAT CGCACTCGCG ATCATTGCCA TACTGAACAA GCTCGGATTG
ACCCTGGTGG GGATCTTCAC AACGCTTACG ACCAAGCTGA ACGGCGGCTG A
 
Protein sequence
MKQLLLKFYE DESGATAIEY GLIAAGIALA IIAILNKLGL TLVGIFTTLT TKLNGG