Gene BBta_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1086 
Symbol 
ID5151046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1129434 
End bp1130396 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content61% 
IMG OID640556074 
Producthypothetical protein 
Protein accessionYP_001237242 
Protein GI148252657 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2175] Probable taurine catabolism dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.658028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCAA TGCAATCTAA AATTGATGGT GAGGCGCTTC CGTTTCTTTT GCGTGCCAGC 
CGCAAGCAGC AGTCACTGAC GGATGCCGTC AGTGAGCTGC GGGGCATAAT CGAGAGGCAG
CTCCAGGCCA GCGGCGGGAT TCTGTTTCGC GACTTTCATC TCGACGGCGC CGAAGCATTC
AGGAGCTTCG CCGCCAGCTT TGGTCATCCG CTGCTCAGCT ATGAATTCGG TTCGACGCCG
CGCACGCAAG TGAGCTCTGG CGTCTACACG TCGACAGAAT ATCCGCCGCA TCAAAGCATT
CCCCTGCACA ATGAGCAGGC CTACACGCGC GATTGGCCGT TGAAGATTTG GTTCTATTGC
GAACAGCCAG CTCAGCAAGG CGGCGAGACG CCGATCGCCG ACAGCCGGCT CATCTACCGC
GACATGCCTG CCGCAATCCG GAGCCGATTT GCCGAGAAGG GCGTCATGTA TGTCCGTAAC
TATGGCAGCG GCCTCGACGT AGACTGGCGA GACGTGTTCG GCACGCAATC GAAGGCCGAA
GTCGAGGCGT ATTGTGCGGC TCATGCGATC GCCTGCGAAT GGAAGGACGG CGATGAGCTG
CGCACACGCC AGGTTTGCCA GGGCACCGCT GTGCATCCCT TCACGGGGGA CAAGGTGTGG
TTCAATCAGG CGCATCTCTT CCATGTCTCC AGTCTTGCAC CCGAGGTGCG CGAAAGCCTG
CTCGACATTG TGAGCGATCC GCTGGAACTG CCCCGCAACG CCTTCTATGG CGATGGCTCG
CCGATCGAGG ATGAGACGCT CGCTGCTGTC CGCGATGTGC TCGATCGCCA CAAGATCATC
TTCCCCTGGC AGGCGGGCGA CGTCGTGATG CTCGACAACA TGCTGACGGC GCATGCCCGC
GAGCCGTTCA AGGGGCCGCG CCGGGTCATC GTCGCGATGG CACAAGCCTA CGGGCTGCAG
TGA
 
Protein sequence
MFAMQSKIDG EALPFLLRAS RKQQSLTDAV SELRGIIERQ LQASGGILFR DFHLDGAEAF 
RSFAASFGHP LLSYEFGSTP RTQVSSGVYT STEYPPHQSI PLHNEQAYTR DWPLKIWFYC
EQPAQQGGET PIADSRLIYR DMPAAIRSRF AEKGVMYVRN YGSGLDVDWR DVFGTQSKAE
VEAYCAAHAI ACEWKDGDEL RTRQVCQGTA VHPFTGDKVW FNQAHLFHVS SLAPEVRESL
LDIVSDPLEL PRNAFYGDGS PIEDETLAAV RDVLDRHKII FPWQAGDVVM LDNMLTAHAR
EPFKGPRRVI VAMAQAYGLQ