| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1041 |
|---|
| Symbol | |
|---|
| ID | 5150715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1084409 |
|---|
| End bp | 1085047 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640556034 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001237202 |
|---|
| Protein GI | 148252617 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.574529 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGGT TCAAGGGTTT CAAGGACGTG CGGCGGCTGC TGTGCATCGG CGCCCATTCG
GATGACATCG AAATCGGGGC CGGAGGCACG GTGCTGCGGA TCATGCGCGA GAATCCCGAC
GTCGCTGTCA CCTGGTGTGT CCTGTCAGGC AATGAGGTGC GGCAGCAAGA AGCCCGGCTC
GCCGCCGAAT CCTTGCTGGG CCCGGACAAG AAGCTCTCGC TGCTGTTGAG GGAATTTCCC
GATGCCTACT TCCCGGAGCA GCGTCGGAGC ATCAAGGAGT TCTTTGAACA GTTCTTGAAG
CCGTCCGATC CGGATCTCAT TTTGACTCAT GCGCGCCACG ACGCTCATCA GGATCATCGC
CTGGTCAACG AGCTGACCTG GAACACGTTC CGGTCGCATC AGATCTGGGA ATATGAAATA
CCGAAATGGG ATGGCGATCT CGGTCAGCCC AACCTCTACG TTCCAGTGGA GCCTGATGAC
GTCACCCGGA AGTTGAATGC GCTCCGTGTG TTCACCAGCC AGAGAAGCAA GCACTGGTTC
GACGAGGAGA CCTTTCGCTC GCTCCTCAGG CTTCGCGGCC TTGAGAGCAA CAGTCGCTAT
GCCGAGGCCT TTACGGCCCG GAAGTTCGTG GTGGGGTAA
|
|---|
| Protein sequence | MIGFKGFKDV RRLLCIGAHS DDIEIGAGGT VLRIMRENPD VAVTWCVLSG NEVRQQEARL
AAESLLGPDK KLSLLLREFP DAYFPEQRRS IKEFFEQFLK PSDPDLILTH ARHDAHQDHR
LVNELTWNTF RSHQIWEYEI PKWDGDLGQP NLYVPVEPDD VTRKLNALRV FTSQRSKHWF
DEETFRSLLR LRGLESNSRY AEAFTARKFV VG
|
|---|
| |