Gene BBta_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1030 
Symbol 
ID5150534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1070428 
End bp1071072 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID640556023 
Producthypothetical protein 
Protein accessionYP_001237191 
Protein GI148252606 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAAA TCTACACGGT ATTCATGTCG ACCCTTCTGG GCGCGATCGT CCTCAGCGGC 
GATGCCCTGG CGCGTAACCG GGTGTCACAC GAGACGGTTC AGCAATCCGC GATCTCCGAG
GGAGGGCCGA CGCTGGCGCC GTTTCAGCAT GTGCGGTTCT GCATCCGTTA TCCTTCGGAG
TGCAAAGCGG ACGCCGAGGG CCGAAGCCGC GTCGACCTCG ACCCCAACAC ATTCGACCTG
CTCGTCCGGG TCAATCGCGA GGTCAATGTC GCGATCGCGC CGACCAACAA GAGCTACGAC
ACCAACCTGT CGGATGGCTG GACGATCGCC CCCGGCGCCG GTGACTGCAA CGACTATGCA
GTGACCAAGC GCCACGAGCT CGTGCAGAAC GGCATTCCGC CGAGAGCGCT TCGGCTCTCG
GTCGTCCGGA CATCGTCCGG GATCGGCCAT CTCGTTCTGG TTGTCGCGAC GAGCAAGGGC
GACCTGGTGC TCGATAATCT CACCGAGACC ATCAGGAATT GGGAGAGCAC CAACTACGCC
TGGATCAAGA TCCAATCGAC GCGTGACGCG CGGTTCTGGA GCGAGGTCAA GCCGGACGCC
TCCACGCTGT CGCGGGCCCA TCACGTCCGG ATTGCCGGCC GCTAA
 
Protein sequence
MAQIYTVFMS TLLGAIVLSG DALARNRVSH ETVQQSAISE GGPTLAPFQH VRFCIRYPSE 
CKADAEGRSR VDLDPNTFDL LVRVNREVNV AIAPTNKSYD TNLSDGWTIA PGAGDCNDYA
VTKRHELVQN GIPPRALRLS VVRTSSGIGH LVLVVATSKG DLVLDNLTET IRNWESTNYA
WIKIQSTRDA RFWSEVKPDA STLSRAHHVR IAGR