Gene BBta_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1023 
Symbol 
ID5151233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1062323 
End bp1064248 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content65% 
IMG OID640556017 
Producthypothetical protein 
Protein accessionYP_001237185 
Protein GI148252600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTGG ATCCCACGCG AACGCCCAGT CACTTTGACC TTCTCACGCA GCCGTTTCGA 
CTCCTGCGCA TCGATCCCGC GGCCTCCAAG CGGGCTGTGA GCGAGGCCCT TCATCTTGCT
CAAGAGGCCC ACACCGCTTC GCCGGGCGAG ATCCAGGCTG CGCACGACGC TCTCTCCGAC
CTCAACACGC GCCTCTTCCA CGAACTGACA TATCCGCTGA GCTGTTCGCC CACCGAGACG
ACGGCATTCT ATCTTGCGCT CGACAACGAT GTTCCGGTCG ACGATGCGCT GTCCTTTGCG
CAGAGCTTGG CTCCGCTCGA TCGCGCCAAT CTTCTGGCGC ATCTCGCAAG CCATCGACCC
GCGCCCGGCG AGCTGCTCAC CGATCTGATC TCGGCCCAGG CCGCGATCGA CGTCAACGAG
GTCTATGCGA ATCTCAAGGC CGCGCGTCAG AGCGCGGAGC TTCCGCCTCC GTCGCTCGCC
AATGTCCATG ATGTGCTGGG GCCTGTTCTC GAACTGCATC TGGCAGCTGC GCTCGACGGC
TATGAGACGG TCTGGGACGC CGCGCCGGCG ATGCTGGACT GCGCCATCCA AATCCTCTCC
GCGAAGGACA CCCATCGCTG GACGCGGCTT GACGTGCTGC TCGACAACTA CCAGAGCGCG
ATCGACGGAC CGCGCCGGGA TGCCGGAGGT TTCATCGAAC GGGTCTGCGC GTTGCTGCGT
GAGCACCCGA AAGACGTGGC GCTGCAGGAG CGCCTCAGGG AATCCGTTCA TCTCTGGACG
TCGCTGTGCC GCCCGCTGCT GGCTCGGCAG CTCACATCCG GCCCAGATGT CGACTTCGAT
ACGCCGCTCG GCGCGATCCG TGAACTCATC GCATTCCTCG CGCAGGCCGG CGAATCCAAG
GCCGCATTGG CGATCAGCGA TGCCAGCAGC GTGATCTTCG CTGCCGTCCC GACCACGATG
GACCAGCTGA GCGCCGACGC CCGCCTGCTG TCCCGACTGG CCGAGACGGC CCAGCTCGAA
GAGCTGAGTA CGGCGATCGA GAGCGCGCAA GCCAATCTCC CGGACATCAT CGCAGCGTTG
GAAAGCTCCG GCTTCGGCGA GCGGTCTGTC GGGCCCGCAC GCGCCCTTTG GAATGCCTTT
GTCCAGACCA CCAAGATCGC CGAGCCGGCC TCGCGCGAGC TGGGCTGGAA GAGGATGCAT
CAGTTCACGC TCAGCCTGAG CAACGCGCCG CAAGCGGGCA AAGCGGTGAT CGCACTCATC
TCCGGATTGA TCGTCTATGG CGAGGCGAAC GCGGCGCCTC CCGCGCTGCT GAAGGAGATG
CGAAACAGCC TGAAGTTCAT GCAATCCTTC GTTGGAGCCG TGCCTCCCCA GAGCAGCCGC
AAGCCAGCTG CGCCGCCCGC CAAGCCAGTG CCCCGACGCC GTCGTCTGGC CGAGGTTCTT
CTCGGACGCA TCCGTCGAAT GGGCCTGCTT CGAAAGAAAA GCGCGCGCCC CAGCCTCCGC
CGACGGCTGT TGCGCCCGTT GGCGCTCGGC GCGGGCGGCC TGGTCGCCAT CATGCTCGGA
GGAGCCGCTA TCAACCTCAG CGCGCATTGG CTCCGCGGCA TTTCATCGGA TTTCACGTCA
TCGGCCGCAA CCGCCGACCC GCCTCCTTTG GCCCGCCAGA CGAAGCCGCC GGTCGGCACC
GGGCAACGCC TGGAATTGGA CGCGGTCCGC TATTGCCATT TCCAGAAGGA ACGGCTGCGG
CTGATCAAGC AATGGATCAA GACGCCGGAA CAGGCCCGTC ATCTGAACCT GCTCGTCGTG
GACTACAATT CCCGCTGCTC GGATTTCTTT TATCGCGACG ATGACCTGCG GCAGGTTCAG
ACCGAACTCG AGGCGAACGC GCCGCGTCTC GAGTTCGAAG CCAAGCAACT CATCGCGGGA
TGGTAA
 
Protein sequence
MAVDPTRTPS HFDLLTQPFR LLRIDPAASK RAVSEALHLA QEAHTASPGE IQAAHDALSD 
LNTRLFHELT YPLSCSPTET TAFYLALDND VPVDDALSFA QSLAPLDRAN LLAHLASHRP
APGELLTDLI SAQAAIDVNE VYANLKAARQ SAELPPPSLA NVHDVLGPVL ELHLAAALDG
YETVWDAAPA MLDCAIQILS AKDTHRWTRL DVLLDNYQSA IDGPRRDAGG FIERVCALLR
EHPKDVALQE RLRESVHLWT SLCRPLLARQ LTSGPDVDFD TPLGAIRELI AFLAQAGESK
AALAISDASS VIFAAVPTTM DQLSADARLL SRLAETAQLE ELSTAIESAQ ANLPDIIAAL
ESSGFGERSV GPARALWNAF VQTTKIAEPA SRELGWKRMH QFTLSLSNAP QAGKAVIALI
SGLIVYGEAN AAPPALLKEM RNSLKFMQSF VGAVPPQSSR KPAAPPAKPV PRRRRLAEVL
LGRIRRMGLL RKKSARPSLR RRLLRPLALG AGGLVAIMLG GAAINLSAHW LRGISSDFTS
SAATADPPPL ARQTKPPVGT GQRLELDAVR YCHFQKERLR LIKQWIKTPE QARHLNLLVV
DYNSRCSDFF YRDDDLRQVQ TELEANAPRL EFEAKQLIAG W