Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1023 |
Symbol | |
ID | 5151233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1062323 |
End bp | 1064248 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640556017 |
Product | hypothetical protein |
Protein accession | YP_001237185 |
Protein GI | 148252600 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTGG ATCCCACGCG AACGCCCAGT CACTTTGACC TTCTCACGCA GCCGTTTCGA CTCCTGCGCA TCGATCCCGC GGCCTCCAAG CGGGCTGTGA GCGAGGCCCT TCATCTTGCT CAAGAGGCCC ACACCGCTTC GCCGGGCGAG ATCCAGGCTG CGCACGACGC TCTCTCCGAC CTCAACACGC GCCTCTTCCA CGAACTGACA TATCCGCTGA GCTGTTCGCC CACCGAGACG ACGGCATTCT ATCTTGCGCT CGACAACGAT GTTCCGGTCG ACGATGCGCT GTCCTTTGCG CAGAGCTTGG CTCCGCTCGA TCGCGCCAAT CTTCTGGCGC ATCTCGCAAG CCATCGACCC GCGCCCGGCG AGCTGCTCAC CGATCTGATC TCGGCCCAGG CCGCGATCGA CGTCAACGAG GTCTATGCGA ATCTCAAGGC CGCGCGTCAG AGCGCGGAGC TTCCGCCTCC GTCGCTCGCC AATGTCCATG ATGTGCTGGG GCCTGTTCTC GAACTGCATC TGGCAGCTGC GCTCGACGGC TATGAGACGG TCTGGGACGC CGCGCCGGCG ATGCTGGACT GCGCCATCCA AATCCTCTCC GCGAAGGACA CCCATCGCTG GACGCGGCTT GACGTGCTGC TCGACAACTA CCAGAGCGCG ATCGACGGAC CGCGCCGGGA TGCCGGAGGT TTCATCGAAC GGGTCTGCGC GTTGCTGCGT GAGCACCCGA AAGACGTGGC GCTGCAGGAG CGCCTCAGGG AATCCGTTCA TCTCTGGACG TCGCTGTGCC GCCCGCTGCT GGCTCGGCAG CTCACATCCG GCCCAGATGT CGACTTCGAT ACGCCGCTCG GCGCGATCCG TGAACTCATC GCATTCCTCG CGCAGGCCGG CGAATCCAAG GCCGCATTGG CGATCAGCGA TGCCAGCAGC GTGATCTTCG CTGCCGTCCC GACCACGATG GACCAGCTGA GCGCCGACGC CCGCCTGCTG TCCCGACTGG CCGAGACGGC CCAGCTCGAA GAGCTGAGTA CGGCGATCGA GAGCGCGCAA GCCAATCTCC CGGACATCAT CGCAGCGTTG GAAAGCTCCG GCTTCGGCGA GCGGTCTGTC GGGCCCGCAC GCGCCCTTTG GAATGCCTTT GTCCAGACCA CCAAGATCGC CGAGCCGGCC TCGCGCGAGC TGGGCTGGAA GAGGATGCAT CAGTTCACGC TCAGCCTGAG CAACGCGCCG CAAGCGGGCA AAGCGGTGAT CGCACTCATC TCCGGATTGA TCGTCTATGG CGAGGCGAAC GCGGCGCCTC CCGCGCTGCT GAAGGAGATG CGAAACAGCC TGAAGTTCAT GCAATCCTTC GTTGGAGCCG TGCCTCCCCA GAGCAGCCGC AAGCCAGCTG CGCCGCCCGC CAAGCCAGTG CCCCGACGCC GTCGTCTGGC CGAGGTTCTT CTCGGACGCA TCCGTCGAAT GGGCCTGCTT CGAAAGAAAA GCGCGCGCCC CAGCCTCCGC CGACGGCTGT TGCGCCCGTT GGCGCTCGGC GCGGGCGGCC TGGTCGCCAT CATGCTCGGA GGAGCCGCTA TCAACCTCAG CGCGCATTGG CTCCGCGGCA TTTCATCGGA TTTCACGTCA TCGGCCGCAA CCGCCGACCC GCCTCCTTTG GCCCGCCAGA CGAAGCCGCC GGTCGGCACC GGGCAACGCC TGGAATTGGA CGCGGTCCGC TATTGCCATT TCCAGAAGGA ACGGCTGCGG CTGATCAAGC AATGGATCAA GACGCCGGAA CAGGCCCGTC ATCTGAACCT GCTCGTCGTG GACTACAATT CCCGCTGCTC GGATTTCTTT TATCGCGACG ATGACCTGCG GCAGGTTCAG ACCGAACTCG AGGCGAACGC GCCGCGTCTC GAGTTCGAAG CCAAGCAACT CATCGCGGGA TGGTAA
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Protein sequence | MAVDPTRTPS HFDLLTQPFR LLRIDPAASK RAVSEALHLA QEAHTASPGE IQAAHDALSD LNTRLFHELT YPLSCSPTET TAFYLALDND VPVDDALSFA QSLAPLDRAN LLAHLASHRP APGELLTDLI SAQAAIDVNE VYANLKAARQ SAELPPPSLA NVHDVLGPVL ELHLAAALDG YETVWDAAPA MLDCAIQILS AKDTHRWTRL DVLLDNYQSA IDGPRRDAGG FIERVCALLR EHPKDVALQE RLRESVHLWT SLCRPLLARQ LTSGPDVDFD TPLGAIRELI AFLAQAGESK AALAISDASS VIFAAVPTTM DQLSADARLL SRLAETAQLE ELSTAIESAQ ANLPDIIAAL ESSGFGERSV GPARALWNAF VQTTKIAEPA SRELGWKRMH QFTLSLSNAP QAGKAVIALI SGLIVYGEAN AAPPALLKEM RNSLKFMQSF VGAVPPQSSR KPAAPPAKPV PRRRRLAEVL LGRIRRMGLL RKKSARPSLR RRLLRPLALG AGGLVAIMLG GAAINLSAHW LRGISSDFTS SAATADPPPL ARQTKPPVGT GQRLELDAVR YCHFQKERLR LIKQWIKTPE QARHLNLLVV DYNSRCSDFF YRDDDLRQVQ TELEANAPRL EFEAKQLIAG W
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