Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1013 |
Symbol | |
ID | 5150632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1053051 |
End bp | 1053626 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640556007 |
Product | hypothetical protein |
Protein accession | YP_001237175 |
Protein GI | 148252590 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.528873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCGA GCGCGAGCTT CGCCCAGAGC GGCGACGTAT CTCCGGTCAC GCTCAAGCCG GGCGACACGC TGTCGATCAC CGTCCTGCAA GACCCCAAAT TCGACCGCAC GGTGATCGTC GATCCCAACG GCCAGATTGC CTTTCCGTTG GCGGGCCACA TCACGGTGAG CGGGTTGACG CCGCAGCGGC TAGAGCGCGT GCTCAAGAGC CGGCTGCAGC GCAATTACAA GGATGCCGGC GAGTTGGAGG TGACGGTTGC ACTCACCAAC GCGGCCAAGC CGGACGTGCC CGAAGACGAT CTGAAGCCAA AGATCTTCAT CACCGGCGAG GTTCTGCGCC CCGGCCCCTA TGCGATTCGC CAGGCCACGA CGCTGGTGCA GGCGCTGTCG CTCGCAGGCG GCCTGGGACC CTTTGCCGCA CGGCGCAGGA TCCAGGTTCG CCGCGGCACG GGCGCCAACG AGCAGATCTT CTCGTTCGAC TACAAGAGCT ACGAGTCGGG CGGGAGCCCT GAATCCAATA TTTCGCTCCA GGCCGGCGAC GTGATCATCG TGCCGGAACG CGGGTTCCTG GAGTGA
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Protein sequence | MSASASFAQS GDVSPVTLKP GDTLSITVLQ DPKFDRTVIV DPNGQIAFPL AGHITVSGLT PQRLERVLKS RLQRNYKDAG ELEVTVALTN AAKPDVPEDD LKPKIFITGE VLRPGPYAIR QATTLVQALS LAGGLGPFAA RRRIQVRRGT GANEQIFSFD YKSYESGGSP ESNISLQAGD VIIVPERGFL E
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