Gene BBta_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1013 
Symbol 
ID5150632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1053051 
End bp1053626 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content65% 
IMG OID640556007 
Producthypothetical protein 
Protein accessionYP_001237175 
Protein GI148252590 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.528873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGA GCGCGAGCTT CGCCCAGAGC GGCGACGTAT CTCCGGTCAC GCTCAAGCCG 
GGCGACACGC TGTCGATCAC CGTCCTGCAA GACCCCAAAT TCGACCGCAC GGTGATCGTC
GATCCCAACG GCCAGATTGC CTTTCCGTTG GCGGGCCACA TCACGGTGAG CGGGTTGACG
CCGCAGCGGC TAGAGCGCGT GCTCAAGAGC CGGCTGCAGC GCAATTACAA GGATGCCGGC
GAGTTGGAGG TGACGGTTGC ACTCACCAAC GCGGCCAAGC CGGACGTGCC CGAAGACGAT
CTGAAGCCAA AGATCTTCAT CACCGGCGAG GTTCTGCGCC CCGGCCCCTA TGCGATTCGC
CAGGCCACGA CGCTGGTGCA GGCGCTGTCG CTCGCAGGCG GCCTGGGACC CTTTGCCGCA
CGGCGCAGGA TCCAGGTTCG CCGCGGCACG GGCGCCAACG AGCAGATCTT CTCGTTCGAC
TACAAGAGCT ACGAGTCGGG CGGGAGCCCT GAATCCAATA TTTCGCTCCA GGCCGGCGAC
GTGATCATCG TGCCGGAACG CGGGTTCCTG GAGTGA
 
Protein sequence
MSASASFAQS GDVSPVTLKP GDTLSITVLQ DPKFDRTVIV DPNGQIAFPL AGHITVSGLT 
PQRLERVLKS RLQRNYKDAG ELEVTVALTN AAKPDVPEDD LKPKIFITGE VLRPGPYAIR
QATTLVQALS LAGGLGPFAA RRRIQVRRGT GANEQIFSFD YKSYESGGSP ESNISLQAGD
VIIVPERGFL E