| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1005 |
|---|
| Symbol | |
|---|
| ID | 5149733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1043470 |
|---|
| End bp | 1044456 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640555999 |
|---|
| Product | putative glycosyl transferase, group 2 family protein |
|---|
| Protein accession | YP_001237167 |
|---|
| Protein GI | 148252582 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.626376 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACC CAGCCCCTCG CACGTTCGGC GTCGTCGCGA TCGGCCGCAA TGAAGGTGAG
CGGCTGAAAC GCTGCCTGAC CTCCATCAAT GGCGCCGCCC GGATCGTCTA TGTCGATTCG
GGCTCGACGG ACGGCTCCGT GGCCTGGGCC GAGCAGGCCG GCATCGACGT CGTCGCGCTC
GACATGAGCC TGCCGTTCAC GGCAGCGCGC GCCCGCAATG CCGGGATGCG GCGATTGCGC
CAGCTTGCGC CCGAGATCGA TCTCGTTCAG TTCGTCGATG GCGACTGCGA GCTGCAGCAA
GACTGGCCGG CCATCGCGAT CACCTATCTC GTCGAACATC CGCAGGTCTG CGCCACCTTC
GGCCGCCGCC GCGAGCGCTT TCCGGAGCGT TCGATCTACA ATCTGATCTG CGACCGCGAA
TGGGATACGC CAGTGGGCGA GGCCAAAGCC TGCGGCGGCG ACGTCATGAT GCGGGTCGAC
GCGCTGGAGG CCGCGGGCGG CTATCGGGAC GATCTGATTG CCGGCGAGGA GCCCGAGCTC
TGTGTCCGGC TGCGCGCCGG GGGTTGGAAG ATCTGGCGCC TTGATCATGA CATGACGCTG
CACGACGCGG CCATGCATCA CTTCTCGCAA TGGTGGCGAC GGCAGGCCCG CAGCGGCTAC
GCGTTTGCCC AGGGCGCTCA TTTGCACGGC AGAACCGACG AGCGGCACTG GGTTTGGGAA
TCGCGCAGAG CCTTGCTCTG GGCGATTCTG ATTCCGTCAG CCATCCTGGC CGGACTCCTG
CTGGCCGGTC CCTTGGCGCT GCTCGTGCTG CTGATCTACC CTGCGCAGGT TCTTCGTCGC
AGCCGCAGAA TGTCAGGCCG CTGGCGCACC CGCTTGCAAC TTGCCTTCTT CGAGCAGCTA
TCGCGCTTTC CCGAAGCCTG GGGGCAGCTC CTGTTCTTTC GCAACCGGCT CCTGGGCCGT
CACGGGCGGC TGATCGAGTA CAAGTGA
|
|---|
| Protein sequence | MTDPAPRTFG VVAIGRNEGE RLKRCLTSIN GAARIVYVDS GSTDGSVAWA EQAGIDVVAL
DMSLPFTAAR ARNAGMRRLR QLAPEIDLVQ FVDGDCELQQ DWPAIAITYL VEHPQVCATF
GRRRERFPER SIYNLICDRE WDTPVGEAKA CGGDVMMRVD ALEAAGGYRD DLIAGEEPEL
CVRLRAGGWK IWRLDHDMTL HDAAMHHFSQ WWRRQARSGY AFAQGAHLHG RTDERHWVWE
SRRALLWAIL IPSAILAGLL LAGPLALLVL LIYPAQVLRR SRRMSGRWRT RLQLAFFEQL
SRFPEAWGQL LFFRNRLLGR HGRLIEYK
|
|---|
| |