| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0994 |
|---|
| Symbol | |
|---|
| ID | 5149073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1028857 |
|---|
| End bp | 1031955 |
|---|
| Gene Length | 3099 bp |
|---|
| Protein Length | 1032 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640555988 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001237156 |
|---|
| Protein GI | 148252571 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.324739 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGATC GCCGTCAGTT GTTGTCCGGG GCGGGTGCCC TCGCGTTCGC CGAGTTGGTC
CCGTCCGTTG TCTCAGCCGC AGATCCTGAG GCTGGACGTC GCATCGTAAT CAACGCGATC
GCAGGTTATG CCAATTTGGC AAAACATTTC GTCTTTAACA GCGATCCTGG CAATCAAGAC
GCCAACGGCT ATCCTATCAA GACGCCCGCG ACAAACATGG GTGCCAACCC GTCGATGCCG
GAGGGGTACT TCGGCGATTT CGTCTGGAAG TTTCGTGGGC GCGGTTCGAT GCAGTTCTCG
CCTGGCGCGC TGATCCGCAG CGGTGGCCAG AACATCGTCG GCGTCAGCGG CAATACCGGG
GAGACGAACT ACAACACCAC GATCCTCGAC AAGACCAATC CGCGGGTCGT ACTGACCTTC
GGCGCCAACA TTCTCAACAT GTCGCCATCG CCCGTCGACA ACGGCGCCGG CGGGCGGCGC
GTGCGCCTGA CGTTCAAGCC GGGCTTCGCC AATTCCGCAA GTCCGGTGAT CAAGGTGCAG
GCGCTGGCCG GTCGTGGCCA AGCCAGTGCG GCCGGCATCT GGAAAAGCGT GCGGGTCGAT
CCGAATACGG TGGATCTGGT CGCCAATGCG CTCACGGGAG AGCCGGCGGC CTGGAATCCG
AACGATCCCT ATCGCGGGCC GGGCGGTGAA GCGATCTGGC AGGCGACGAA CATCGCCGTC
TACATCCTGG CCCAGGGCAC GTTTTCGGGA TTCAGCAATC TCGTATTCTG CAAGGCCGAG
AACGAGACGC TGGTCGATTC CGGGGCGCTC GTCGATCCGC TTCTGATCGA GCAGATGCGA
CATTTGCGGC CATCCTGGCT GCGATTCATG GATCTCACCG GGGTACAGGC CAGCTATGAG
AGCGAGTTCG CGCGGCGCGT CCCGGCGGCG AGCTTGTTCT ATCCTGGGCC CGGAGGAAGG
TTCGTGCCGG ATTATTGGGT CGGTAGCATC AAGCGGGGCC CCGAAGATGC CTACACGTGT
GTCAGCCGGT CGGGGCCGAG TGCGGGACCG TACCGGGACA ACGAGGTCGT TCAGGGAGTT
CTCGATCTCC CCAATAAAGG TATCAATCCG ACGTTGAATG TCGATGGCCG CGGGGCGAAG
TACATTTACG GATTCGGTGC GCAGTGTCGA ATACTGAGAT TGTCGGGCAC TATTCCTGCG
CCGGGCAGCA AGTTCGAGTT CAGGTTTTCC GCGCCATGGC TCAATGGCGG TAAGCCGTAT
GATGCATCCT ATGTTGTCGG ATCCCGCAGG CGCTACCAGG ATTCGAGTTT CGCCGGCATC
AAAGCAAATC TCATGGACCT TTTCGCTGCC GATCCGATAC TCACCGGCAA GGTCGCGGTC
TGGAATTCCG GAGACTTGAG CTTCTTTCCG ATTACCCCTC ACATGGGCGC ACTGTCTATC
GACTACCTGT CAGGGCCTGC GGGCACGTTT TGCCGCATCG GTCGACTCGA TCCCTACGCC
TTCGCGGCTG GTCAGAATCG AATTCGCATG CGCTTCGCCG GAAATGTCTC GAATGCGGAG
ATATTGTCGC TGACCTTCAA TCGCGCCGAT CTTCCGGGCG GCTCATATAC ATTGTCTTAC
GAGACCCGGA TCGGGACCGA CAAGTCGCTG CAGGTGCTAT GCGCGAGTCT CAATCAGGCC
ATCAACAACG ATACGGTATT GAAGCAGGCC GGCATCTCTG CGTTCCCCTT CGGACTGCCG
CCCAACACCT TGGACATTCA GCAGGCCGAC ACCTGGGCCG GCGAGGGCCT GTCGCTGTCG
CTGCGCAGCA CCGGCGCCGT GTCGGCGACC TTCGGCGAAG GCGGTGCCAC CGGGACCTTC
ATCTACAGCT ATCTGCTCGA CGGCTGGATC TGGCGTCCAG GCGGCATGCT GCAATCCATT
CCATTCGAAT ACATGGTGGA GTTGTGCAAC GCCACCGGTG CGGGCTGTTG GGTCAACTGG
CCGATCAACA CCAACGCGCA GTTCATCACT GACGTCACCA ACTACTTCCG GGACAATCTC
AAGCCGAACG TGAATTTCGG CACGGAAGTT GGCAACGAGA TGTGGAACTT CGGCCAATCA
CCCTGGGGAA GGGCGATGGC GAAGGGCTTC TGCCTGGGGT TCGCATCCGG GAGTAACAAT
CCGAACTACA GCATCACCGC ACTGCGAACG AAGCAGTATG GTGATCTCAC TATCGCCGCG
TGGACGGCAA AACGACCGCG AGCTCAGCTT TATCTTTTCA ATCAGTCGGC GACCTGGGAT
CTTGGCAATA CCAACATGTT CCAGTTCAAG GGCGGTAGTC TGGACGCCGC CGCGAACCGC
ATTTATGCCG CGCATGGCGG ACTTGGTGGC GGACCCGCCC CGTCCTACAA CGCAGCGCCA
AATCGGCCGA TCGATATTTG TGATGCCATC GGCGTTGCGC CATATTGGGG ATCGCCCTGG
ATTGCGGGCG ACGTGAACTA CATCAAGGGA GCAGCGTTTG AAAATGCGCC GCTGCTGCAG
GCGGCGAAAG ATCATGCCGC CGGCAATGTC GACGCGGCCT ATACCGCCCT GTCGGCTCAG
ATCTATGGGG CCGTGAAACG AAGCTCGCCA GGCGCGGGCG GCATTACCTT TGAGCATTAC
AAGACGAAGG TCTATCCTCA GCTTGAGCAG ATCGCCGCAT CATTCGATGC CGGCCGGTCG
CGCAAGATGG CTGTGATCCA CTATGAAGGC GGGCCACAAT TCGGGGTCGG CAACATCAAC
AATGGCACCA ATGATCCTGT CACCGATGTT CCGGGGCTCA CCGCGAGGAT CAAGTCGCTG
GGGTGGAACG TCTCGGCCTA CACGGTGAGT GGTCGGGACG ACGCCACTGA AATGGCGTCA
CAGATCGTCG ATATGATCTA TCGATACAAA TTCAGTCCGC AATATAAGGC GCTTTACAAG
CAGGGATTTG CCGACGTGGT TGCTGCCCAT CCAGGCCGCG AGGCAGCAGG TGCGCAATAC
GGCTATGAGC GATCGCAATG GGGTCTGTTC CCGCGCGGCT ACGGCGCCGA GCATTATTCG
AGCTACGACG CCATCCACGA GTTCAACAGG GGAGGTTGA
|
|---|
| Protein sequence | MLDRRQLLSG AGALAFAELV PSVVSAADPE AGRRIVINAI AGYANLAKHF VFNSDPGNQD
ANGYPIKTPA TNMGANPSMP EGYFGDFVWK FRGRGSMQFS PGALIRSGGQ NIVGVSGNTG
ETNYNTTILD KTNPRVVLTF GANILNMSPS PVDNGAGGRR VRLTFKPGFA NSASPVIKVQ
ALAGRGQASA AGIWKSVRVD PNTVDLVANA LTGEPAAWNP NDPYRGPGGE AIWQATNIAV
YILAQGTFSG FSNLVFCKAE NETLVDSGAL VDPLLIEQMR HLRPSWLRFM DLTGVQASYE
SEFARRVPAA SLFYPGPGGR FVPDYWVGSI KRGPEDAYTC VSRSGPSAGP YRDNEVVQGV
LDLPNKGINP TLNVDGRGAK YIYGFGAQCR ILRLSGTIPA PGSKFEFRFS APWLNGGKPY
DASYVVGSRR RYQDSSFAGI KANLMDLFAA DPILTGKVAV WNSGDLSFFP ITPHMGALSI
DYLSGPAGTF CRIGRLDPYA FAAGQNRIRM RFAGNVSNAE ILSLTFNRAD LPGGSYTLSY
ETRIGTDKSL QVLCASLNQA INNDTVLKQA GISAFPFGLP PNTLDIQQAD TWAGEGLSLS
LRSTGAVSAT FGEGGATGTF IYSYLLDGWI WRPGGMLQSI PFEYMVELCN ATGAGCWVNW
PINTNAQFIT DVTNYFRDNL KPNVNFGTEV GNEMWNFGQS PWGRAMAKGF CLGFASGSNN
PNYSITALRT KQYGDLTIAA WTAKRPRAQL YLFNQSATWD LGNTNMFQFK GGSLDAAANR
IYAAHGGLGG GPAPSYNAAP NRPIDICDAI GVAPYWGSPW IAGDVNYIKG AAFENAPLLQ
AAKDHAAGNV DAAYTALSAQ IYGAVKRSSP GAGGITFEHY KTKVYPQLEQ IAASFDAGRS
RKMAVIHYEG GPQFGVGNIN NGTNDPVTDV PGLTARIKSL GWNVSAYTVS GRDDATEMAS
QIVDMIYRYK FSPQYKALYK QGFADVVAAH PGREAAGAQY GYERSQWGLF PRGYGAEHYS
SYDAIHEFNR GG
|
|---|
| |