Gene BBta_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0972 
Symbol 
ID5155582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1008588 
End bp1010096 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content67% 
IMG OID640555966 
Productacyl-CoA synthetase 
Protein accessionYP_001237134 
Protein GI148252549 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.534904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCGCC ATCCGTCGCG CATTGCCTTC AGCTGGCCCG GCGGCTCGCT GTCCTATCAG 
GGGGCGATCG ACCTGATCGG GCGCATGCAA AGCGTGTTCA TGCGGCTCGG CCTGCGGCCG
GGAACATGCG TCGCGTTCCT CACCGCCAAC CGCGCCGACA CATGGTGCGC CGGCATCGCG
GCGCAGCTGT CGCGGCTCGC GATCACCTGG CTGCACCCGC TGGGGTCGTT GGACGATCAG
CTGTTCCAGC TCGCCGATTC CGAATCGCAG GTCCTGGTGG TCGACGCCGC AGCCTTCCGC
GACCGCGGCG GCGAACTCGC CTCGCGCGCC GACGGCCTCC GCCACGTCTT CACGCTCGGA
CCGGCAGGCT ATGGCGCCGA CCTGCTGTCG GCGATCGAGG CCGCGGGCCA GGCCAGCGCG
CGCAACTTCG CCACACCCAC GGATGTCGCG ACGCTGAACT ACACCGGCGG CACCACCGGC
AAGTCCAAAG GCGCGCTGCG CCATCACCGC GAATATGGCG GCTTCGCCAC TGCAATCCTG
GCCGATTTCG AGATACCGGA ACGCGCCAGC TATCTGGCGG TGGCGCCGAT CAGCCATGTC
GCGGGCACCA AGGTGCTGCC GACGCTGATG CGCGGCGGCA CCGTGCACAT GCTGAAGGGG
TTCGACCCGG AGGCGGTGTT GAAGACGATC GAACGCGAGC GCATCAACTT CACTTTGTTC
GTGCCGACCA TGATCTACGT GCTGCTCGAC CATCCGGCGC TGAGCCGGAC CGATCTCTCC
TCGCTCGACC TCGTGCTCTA CGGCGCCTCG GCGATGTCGC CGACGCGGCT CGTCGAGGGC
ATCGAGCGCA TCGGCCCGGT GTTCTCGCAG CTCTACGGCC AGACCGAATG CTATCCGGTC
TCGGTGCTGC GCAAGGCCGA TCATGATCCG AAGCAGCCGG AGCTGTTCCT GTCCTGCGGC
TTCCCGATCG CCGCCTGCGA TGTCAAGATT CTGAACGACG ATGATCAGGA GGTCGCGCAA
GGCGAGGCCG GCGAAATCTG CGTGCGCGCG CCGCATGTCA TGGCGGAATA TTGGAAGCGG
CCGGACATCA CCGCCGAGAC CTTGAAAAAC GGCTGGCTGC ACACCGGCGA CATCGCCCGC
CGCGACGAGC GCGGCTACAT GTACATCCTC GATCGCAAGA AGGACATGAT CGTCTCCGGC
GGCTTCAACA TCTTTCCGCG TGAGATCGAG GATGTGCTCA CCCAGCACAG CGATGTCGCG
ATGTGCGCCG TGGTCGGCGT GCCCGACGAC AAATGGGGCG AGGCCGTCAC CGCGATCGTG
GTGCCGCGCG CCGGCACGCA GCCGAACGCG ACCGAGCTGA TCGAGCTGGT GAAGGCGCGC
AAGGGCTCGG CCCATGCGCC GAAGCGCATC GAGTTCGTGG CCGAGCTGCC GGTGACCGGC
GTCGGCAAGG TCGACAAGAA GGTGCTGCGC GCACGCTATT GGGAAGGACG CGGGCGGATG
GTGGGGTGA
 
Protein sequence
MSRHPSRIAF SWPGGSLSYQ GAIDLIGRMQ SVFMRLGLRP GTCVAFLTAN RADTWCAGIA 
AQLSRLAITW LHPLGSLDDQ LFQLADSESQ VLVVDAAAFR DRGGELASRA DGLRHVFTLG
PAGYGADLLS AIEAAGQASA RNFATPTDVA TLNYTGGTTG KSKGALRHHR EYGGFATAIL
ADFEIPERAS YLAVAPISHV AGTKVLPTLM RGGTVHMLKG FDPEAVLKTI ERERINFTLF
VPTMIYVLLD HPALSRTDLS SLDLVLYGAS AMSPTRLVEG IERIGPVFSQ LYGQTECYPV
SVLRKADHDP KQPELFLSCG FPIAACDVKI LNDDDQEVAQ GEAGEICVRA PHVMAEYWKR
PDITAETLKN GWLHTGDIAR RDERGYMYIL DRKKDMIVSG GFNIFPREIE DVLTQHSDVA
MCAVVGVPDD KWGEAVTAIV VPRAGTQPNA TELIELVKAR KGSAHAPKRI EFVAELPVTG
VGKVDKKVLR ARYWEGRGRM VG