Gene BBta_0917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0917 
Symbol 
ID5150598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp950083 
End bp950913 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content63% 
IMG OID640555912 
Productputative ABC transporter, permease protein 
Protein accessionYP_001237080 
Protein GI148252495 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.524726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.693648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA AGGTCACCGG ACGTCATGTC GCGATCTCCA CGCTGGCTGC ATGGCTCGCC 
GGCTTCGTCA TCTTCTTCCC GATCCTGTGG ATGGTGCTGG CAAGCTTCAA GACCGAGCTG
GAGGCGTTCG CGACGCCGCC CTCGTTCCTG TTCTTCCATT GGACCACCGA GAACTACGCC
ACCGTGCAGG AGCGCAGCGA TTATCTGCAT CACGCGCTGA ACTCGCTGAT CGTCGCCGGC
GGCTCGACGC TCATTGCCAT GCTGATCGCC ATTCCCGCGG CGTGGTCGAT GGCGTTCTCG
CCGACCAAGC GCACCAAGGA CATCCTGCTC TGGATGCTCT CGACCAAGAT GATGCCGCCG
GTCGGCGTGC TCGTGCCGAT CTACCTCATC TACAAGAACA TGGGGCTGCT CGATACGCGG
ACCGGCCTGG TCTTCATCCT CTGCCTCGGC AATCTGCCGA TCGTGATCTG GATGCTGTTC
ACTTACTTCA AGGAGATCCC GAAGGACATC CTGGAAGCGG CGCGGATGGA TGGCGCGACG
ATCGGACGCG AGCTGATCTA CGTGCTGACG CCGATGGCGA TCCCCGGTCT GGCCTCGACC
TTGCTGCTCA ATCTCATCCT GGCCTGGAAC GAGGCGTTCT GGACCTTGAA CCTGTCGACC
CTGAATGCGG CGCCGCTGAC GACCTTCATC GCCTCCTATT CGAGTCCGGA GGGCCTGTTC
TGGGCGCGGC TGTCGGCGGC CTCCACGCTC GCGATCGCGC CGATCCTGAT CATCGGCTGG
TTCAGCCAGA AGCAGCTCGT GCGCGGGCTG ACCTTCGGCG CAGTGAAGTA A
 
Protein sequence
MARKVTGRHV AISTLAAWLA GFVIFFPILW MVLASFKTEL EAFATPPSFL FFHWTTENYA 
TVQERSDYLH HALNSLIVAG GSTLIAMLIA IPAAWSMAFS PTKRTKDILL WMLSTKMMPP
VGVLVPIYLI YKNMGLLDTR TGLVFILCLG NLPIVIWMLF TYFKEIPKDI LEAARMDGAT
IGRELIYVLT PMAIPGLAST LLLNLILAWN EAFWTLNLST LNAAPLTTFI ASYSSPEGLF
WARLSAASTL AIAPILIIGW FSQKQLVRGL TFGAVK