Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0917 |
Symbol | |
ID | 5150598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 950083 |
End bp | 950913 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640555912 |
Product | putative ABC transporter, permease protein |
Protein accession | YP_001237080 |
Protein GI | 148252495 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.524726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.693648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCA AGGTCACCGG ACGTCATGTC GCGATCTCCA CGCTGGCTGC ATGGCTCGCC GGCTTCGTCA TCTTCTTCCC GATCCTGTGG ATGGTGCTGG CAAGCTTCAA GACCGAGCTG GAGGCGTTCG CGACGCCGCC CTCGTTCCTG TTCTTCCATT GGACCACCGA GAACTACGCC ACCGTGCAGG AGCGCAGCGA TTATCTGCAT CACGCGCTGA ACTCGCTGAT CGTCGCCGGC GGCTCGACGC TCATTGCCAT GCTGATCGCC ATTCCCGCGG CGTGGTCGAT GGCGTTCTCG CCGACCAAGC GCACCAAGGA CATCCTGCTC TGGATGCTCT CGACCAAGAT GATGCCGCCG GTCGGCGTGC TCGTGCCGAT CTACCTCATC TACAAGAACA TGGGGCTGCT CGATACGCGG ACCGGCCTGG TCTTCATCCT CTGCCTCGGC AATCTGCCGA TCGTGATCTG GATGCTGTTC ACTTACTTCA AGGAGATCCC GAAGGACATC CTGGAAGCGG CGCGGATGGA TGGCGCGACG ATCGGACGCG AGCTGATCTA CGTGCTGACG CCGATGGCGA TCCCCGGTCT GGCCTCGACC TTGCTGCTCA ATCTCATCCT GGCCTGGAAC GAGGCGTTCT GGACCTTGAA CCTGTCGACC CTGAATGCGG CGCCGCTGAC GACCTTCATC GCCTCCTATT CGAGTCCGGA GGGCCTGTTC TGGGCGCGGC TGTCGGCGGC CTCCACGCTC GCGATCGCGC CGATCCTGAT CATCGGCTGG TTCAGCCAGA AGCAGCTCGT GCGCGGGCTG ACCTTCGGCG CAGTGAAGTA A
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Protein sequence | MARKVTGRHV AISTLAAWLA GFVIFFPILW MVLASFKTEL EAFATPPSFL FFHWTTENYA TVQERSDYLH HALNSLIVAG GSTLIAMLIA IPAAWSMAFS PTKRTKDILL WMLSTKMMPP VGVLVPIYLI YKNMGLLDTR TGLVFILCLG NLPIVIWMLF TYFKEIPKDI LEAARMDGAT IGRELIYVLT PMAIPGLAST LLLNLILAWN EAFWTLNLST LNAAPLTTFI ASYSSPEGLF WARLSAASTL AIAPILIIGW FSQKQLVRGL TFGAVK
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