| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0892 |
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| Symbol | poxB |
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| ID | 5152629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 925800 |
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| End bp | 927530 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640555886 |
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| Product | pyruvate dehydrogenase |
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| Protein accession | YP_001237056 |
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| Protein GI | 148252471 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.129247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCA TTGCAGACCA GATCGTCGAG ACGCTTGAAA TCGCGGGCGT GAAACGAATC
TATGGCGTCG TCGGCGACAG CCTCAACGGG CTCACCGAAT CGCTGCGCGT GCGCCAGACG
ATCGACTGGG TGCATGTCAG GCATGAGGAG GCCGCGGCCT TCGCGGCGTC GGGGGAGTCG
CAGATCACGG GCAAGCTCGC GGTGTGTGCC GGCTCCTGCG GTCCCGGCAA TCTGCATCTG
ATCAACGGTC TTTATGACGC GCAGCGCAGC CGCACGCCGG TGCTGGCAAT CGCCGCGCAC
ATTCCATCGA GCGAAATCGG CGGCGGCTAT TTCCAGGAGA CGCATCCGCA GAACCTGTTC
CGCGAATGCA GCGTCTATTG CGAGCTGATC TCCGATCCCA TGCAGATGCC GTTCGTGCTG
GAAAACGCGA TCCGCGCCGC AGCCGGCGAG CGCGGTGTCG CCGTGATTGT CATTCCCGGC
GATGTCGCGT TGAAGGCTGC GCCGAAACGG GCGCTGCCGC CGGCTGTCGG CCTGGTGCCG
CCGAAGCCGG TGGTGCGGCC AGCCGAGCCG GAGCTCGCTG CACTCGCGGC GCTGCTCAAT
GGCGCCGAGC GCGTGACCTT GTTCTGCGGC CGCGGCTGTG CCGGCGCGCA TGCCGAACTG
ATGCAACTCG CCGAGACGCT GCAGAGCCCG ATCGTGCATG CGCTCGGCGG CAAGGAGCAT
GTCGAATACG ACAATCCCTA CGATGTCGGC CTGACCGGCT TCATCGGCTT CTCCTCGGGC
TATCATGCCA TGCACAGCTG CGACACGCTG GTGATGCTCG GCACTGATTT TCCCTACAAG
CAGTTCATCC CGAACGACAT CAGAATCGCG CAGGTCGACA TCCGGCCGGG CCAGCTCGGC
CGCCGCGCCC GGCTCGATGT CGGCGTGGTC GGCGATGTCG GTGAGACCAT CCGCGCGTTG
CTGCCGAAGC TCACGGCCAA GTCCGATCGC CGTCACCTCG ACGACAATCT CGCGCGCTAC
GCCTCGGCGC GAAAGGGCCT CGATGATCTC GCCGTCGGCA CGCCCGGCCG CCGGCCGATC
CATCCGCAAT ATCTGACACG GCTGATCAGC GAGACGGCGT CGGACGATGC CGTCTTCACC
TTCGACGTCG GCATGCCGAC GATCTGGGCC GCGCGCTACA TCGCCATGAA CGGCCGCCGC
CGCCTGGTCG GCTCCTTGGT GCACGGCTCG ATGGCCAATG CGATGTCGCA AGCGATCGGC
ATCCAGGCCG CGCAAGCGGG GCGGCAGGTG ATCTCTTTGT CCGGCGATGG CGGCTTCGCG
ATGCTGATGG GCGATCTCAT CACCCTGAAG CAGATGAAGC TGCCGGTGAA GGTCGTGATC
TACAACAACG GCACGCTCGG TTTCGTTGCG CTGGAGATGA AGGCCTCCGG CTTCGTCGAG
CACGGTACCG ATCTGGAGAA TCCGGATTTC GCCGCGATGG CGCAGGCCAT GGGCATCCAC
GGCCGCCGCG TCGAGGATCC CGGCGAACTG CCGGGCGCGG TCGCCGACTG GCTCGCGCAT
GATGGCCCCG CGGTGCTCGA CGTGGTCACC GCCCGGCAGG AGCTGTCGAT GCCGCCGACC
ATTGGCCTCG AACAGGTCAA GGGCTTCAGC GTCTGGCTGA TCCGCGCCGT CATGAGCGGC
CGCGGCGACG AGGTGATCGA TCTGGCGAAG GAGAATCTGC TGCCGCGGTG A
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| Protein sequence | MATIADQIVE TLEIAGVKRI YGVVGDSLNG LTESLRVRQT IDWVHVRHEE AAAFAASGES
QITGKLAVCA GSCGPGNLHL INGLYDAQRS RTPVLAIAAH IPSSEIGGGY FQETHPQNLF
RECSVYCELI SDPMQMPFVL ENAIRAAAGE RGVAVIVIPG DVALKAAPKR ALPPAVGLVP
PKPVVRPAEP ELAALAALLN GAERVTLFCG RGCAGAHAEL MQLAETLQSP IVHALGGKEH
VEYDNPYDVG LTGFIGFSSG YHAMHSCDTL VMLGTDFPYK QFIPNDIRIA QVDIRPGQLG
RRARLDVGVV GDVGETIRAL LPKLTAKSDR RHLDDNLARY ASARKGLDDL AVGTPGRRPI
HPQYLTRLIS ETASDDAVFT FDVGMPTIWA ARYIAMNGRR RLVGSLVHGS MANAMSQAIG
IQAAQAGRQV ISLSGDGGFA MLMGDLITLK QMKLPVKVVI YNNGTLGFVA LEMKASGFVE
HGTDLENPDF AAMAQAMGIH GRRVEDPGEL PGAVADWLAH DGPAVLDVVT ARQELSMPPT
IGLEQVKGFS VWLIRAVMSG RGDEVIDLAK ENLLPR
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