Gene BBta_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0888 
Symbol 
ID5153028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp923783 
End bp924451 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content62% 
IMG OID640555884 
Producthypothetical protein 
Protein accessionYP_001237054 
Protein GI148252469 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.541454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTTGTG AGACGGTGAG GCAAGAAGGA ATGCTGAAGC TCGATCATCT CACGGTCATC 
GCGCCGAGCC TCGCCGAGGG CGTTGCGCAT GTTCGCTATT GCCTCGGTCT CAATGTTCCG
TTCGGGCGGC GCCATGACTA TATGGGGACT CACAATCACC TGCTTCAGCT CGGCGACGGG
GTCTATTTGG AAATCGTGGC CGTCGATCCC GAGGCGGCCA TGCCGCGGCG CTCGCGCTGG
TTTGGTCTGG ATGATCAGAA GAGGGTGCGT GAGGATTGGA ACGACGGGCG CCGCCTGCGC
GGCTGGGTCG CGCGGACGGA TTTAATTGAT GTGGTCATGG TCGGACATCC AGATGTGTTC
GGCGCAAAGG TGGCGCTGCC GGACGCCGAC CCGTCATTCG ATTTCACCAT TCCCGAGGAT
GGCTCGTTAC CGCACGATGG TGCAGTCCCC TCCATCATCG ACAGGCGCGG CAAGCCACGT
GCAATGGCGG GCATCGCGGA TCTCGGCGCG CGATTGAGGT CTTTCACGCT CGAATATCCG
GACCCAACGG CGCTGCAAGC CATCTATCGT GCGCTTCCGG TGGATCGTCC GCCTGAGATC
AGGCCCGGCC CGCAATTGCG CTATCGTGCG CAGATTGAAA CACCGGCCGG CCTGAAGGAG
CTGACGTGA
 
Protein sequence
MICETVRQEG MLKLDHLTVI APSLAEGVAH VRYCLGLNVP FGRRHDYMGT HNHLLQLGDG 
VYLEIVAVDP EAAMPRRSRW FGLDDQKRVR EDWNDGRRLR GWVARTDLID VVMVGHPDVF
GAKVALPDAD PSFDFTIPED GSLPHDGAVP SIIDRRGKPR AMAGIADLGA RLRSFTLEYP
DPTALQAIYR ALPVDRPPEI RPGPQLRYRA QIETPAGLKE LT