Gene BBta_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0879 
Symbol 
ID5154370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp912942 
End bp913646 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content67% 
IMG OID640555876 
Productputative 3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001237046 
Protein GI148252461 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAC AACGGGTCGC GCTGGTCACC GCCGGCGGCA GCGGCATGGG TGCGGCAGCA 
GCCCGCCGCT TGGCCGCGGA CGGCTTTCAG GTCGGCATCC TCTCTTCCTC CGGGAAGGGC
GAGGCGCTGG CGACCGAACT CGGCGGCCTC GGCGTCACCG GCTCGAACAA GTCGAACGAC
GATCTGAAGC GGCTCGTCGA CGGCGCGATG CGCCGGTGGG GCCGCATCGA CGTGCTCGTC
AACAGCGCTG GCCACGGCCC GCGGGCGCCG ATCCTGGAGC TGAGCGACGA GCAGTGGCAC
ACGGGGCTCG ACACCTACCT GCTCAACGTG ATCCGTCCGT CGCGTCTGGT GACTCCGATC
ATGCAGACGC AGAAGAATGG CGCGATCATC AACATTTCGA CCGCCTGGAC CTTCGAGCCG
TCGGCCATGT TCCCGACCTC GGCGGTGTTT CGCGCGGGGC TGGCCTCCTT CACCAAGATC
TTCGCCGACA GCTATGCGGC AGACAACATC AGGATGAACA ACGTGCTGCC AGGCTGGATC
GACAGTCTCC CCGCCACCGA AGAGCGCCGC AGCAGCGTGC CGATGGCCCG CTACGGCAAG
GCCGAGGAGA TCGCCGCGAC GATCGCCTTC CTCGCCTCGG ATGGCGCAGC CTATATCACC
GGCCAGAACA TCCGCGTCGA CGGCGGCCTG ACACGCAGCG TGTGA
 
Protein sequence
MAEQRVALVT AGGSGMGAAA ARRLAADGFQ VGILSSSGKG EALATELGGL GVTGSNKSND 
DLKRLVDGAM RRWGRIDVLV NSAGHGPRAP ILELSDEQWH TGLDTYLLNV IRPSRLVTPI
MQTQKNGAII NISTAWTFEP SAMFPTSAVF RAGLASFTKI FADSYAADNI RMNNVLPGWI
DSLPATEERR SSVPMARYGK AEEIAATIAF LASDGAAYIT GQNIRVDGGL TRSV