Gene BBta_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0870 
Symbol 
ID5154463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp902085 
End bp904352 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content69% 
IMG OID640555867 
Productputative aldehyde or xanthine dehydrogenase protein, molybdenum binding subunit 
Protein accessionYP_001237037 
Protein GI148252452 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0911403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCTG AGCTCAATCT CTCCCGCGAT CCCGCCCATC TCCGTCACGG CTCCACGATC 
GGCCAGCCGC TGTCGCGCAT CGACGGCCTG GCGAAGGTCA CGGGCCGCGC GCGCTATGCC
GCCGACAACA ATCCGTCCGG CATGCTGTAT GCGGTGCTCG CCGTCTCCAG CATTGCGCGC
GGCCGGGTCG TGTCGCTCGA TGTCGACGCC GCCAAGGCGC ATCCCGGCGT GGTCGCGGTG
ATGACCTCGG CCAACCGGCC GCCGCTGCAG GCCGATCCCG ACGGCAAGCC AAACCCGTTC
GCGTTCCGCT TCGAAGCGCT GCAGAACGAT CGCGTCCGCT ACGCCAATCA GCCGATCGCA
GTGGTAATCG CCGAGAGCCT CGAAGCGGCC ACCGAGGGCG CCGCGCTGCT GGCGCCGCGC
TATCAGGCCG AACCGGCGCG CATCGGGCTC GACACCGGCG AGGCCTATGT GCCGCCCGTC
GTCGGCATGG GCTTTCCGGC CGAGAGCCAT CACGGCGACG CCGCGGCCGC GCTCGCCGGC
AGCGACAAGC GGATCACGGC GACCTATGAG ACCCCGGCGC ATTATCACAA TGCGATGGAG
CCGCATGCGA TCGTCGCGGA GTGGCAGGGG GATCGCCTCA TCATCGACAC GCCGACCCAG
GGCCTGGTGA TGATGCGCGC GCGCCTCGCC GAGCTGTTCG GCATCGCCCC CGAGAACATC
TTGATCCGCA GCCCCTATCT CGGCGGCGGC TTCGGCGGCA AGGGCCTGAT GGCCGGCGCG
CAGGTGCTCG GCATCCTCGC CGCCAAATTG GTGGACCGTC CGGTCAAGCT GGTGGCGCGC
CGCGAGCAGC TCTACGGCCC GTTCGGCCAT CGCTCCCCGA CGCGGCAGAC GCTGAAGCTC
GGCGCGAATG CGGCGGGACA GCTCTCGGCC ATCCATCATC ATGCCCGGAT CGCAACCTCG
AGCTTCGAGG ATTTCTACGA GGCAGCGGCG CATGTGACGC ACACGCTCTA TGCCGCGCCG
GCGATCAGCA CCACCTATGA CGCCGTGCGC ATGGACACGG GCACGCCGCT GTTCGTGCGC
GCGCCGGGCA TTGCGCCGGG ATCGATCGCG CTGGAGAGCG CGGTGGACGA GATGGCCGAG
GCCTGCGGCC TCGATCCGCT GGCGTTCCGC GTCAAGAACT ACGCCGAGGT CGAGCCCGCC
ACTGGCAAGC CGTTCTCGTC CAAGGCGCTG CGCGACTGCT ATACGCAGGG CGCGGAACGG
TTCGGCTGGT GGGAGCGGCC GCTGAAGCCG CGGACGATGC GCGACAAGGA CGGTTTCCTG
GTCGGCTGGG GCATGGGCAC GGCCACGTTC CATGCGCTGA TGTTCGCCGG TCAGGCCCGC
GCGGTGATCC GGCGCAACGG CAGCGGCGTG GTGGAGAGCG GCGCGCATGA CATGGGCCAG
GGCGCCTGGA CCGCCTTCGC GCAGATCGCC GCCGACGCGC TCGCGCTCGA TCTCGACCAG
GTGACGTTCA AGGCCGGCAC CTCCGACCTG CCCGATGCCG GCATCGCCGG TGGCTCGGCC
CACACCGCAA CCGTCGGCAC CGCGATCCAC AATGCCGGCG CCGCCGTGAT CACCAAGCTC
GCCGAGCTCG CCACCTCCGA CCAGCGCTCG CCGCTGTTTG GCGCCGGCAA TGCCGGCGTG
ATCGCGCGCA ATGGCCGGCT GCTCCGGCGC GACGATGAGG GGCGCGGCGA GAGCTACGCC
GAGATCCTCG CGCGCGCCGG CCTCGACGAG GTCGAGGGCT CCGGCGCGGG CATGCCGGAC
CCGGCTGCGA ACGAGCACTA CGCGATGCAT TCGCATGGCG CCGTGTTCGC GGAGGTGAAG
GTCGATCCCG ATCTCGGTCA GGTGCGTGTC ACCCGCATGA TCGGCGCCTT CGCCGCCGGG
CGGATCATCA ATCCGAAGCT GGTGCGGAGC CAGCTCATCG GCGGCATGAT CTGGGGGGTC
TCGCTGGCGC TGCATGAGGA GGCAATCATC GATCACCGCT CGGGGCGGAT CATGAACGCC
AATCTCGGCG AATATCATGT GCCGGTGAAT GCCGACATCC CCGCGATCGA GACGTTCACG
GTCAACGAGC ACGATCCGTT CGTAAACCCG CTGGGCATCA AGGGCGTCGG CGAAATCGGC
ATCACCGGCT CGGCGGGCGC CGTGGCCAAT GCGGTGGCGC ATGCCACCGG CATTCGGGTC
CGACGCTTCC CGGTGCGGAT CAGCGACCTG GTGCCACCGG TGAGCTGA
 
Protein sequence
MTPELNLSRD PAHLRHGSTI GQPLSRIDGL AKVTGRARYA ADNNPSGMLY AVLAVSSIAR 
GRVVSLDVDA AKAHPGVVAV MTSANRPPLQ ADPDGKPNPF AFRFEALQND RVRYANQPIA
VVIAESLEAA TEGAALLAPR YQAEPARIGL DTGEAYVPPV VGMGFPAESH HGDAAAALAG
SDKRITATYE TPAHYHNAME PHAIVAEWQG DRLIIDTPTQ GLVMMRARLA ELFGIAPENI
LIRSPYLGGG FGGKGLMAGA QVLGILAAKL VDRPVKLVAR REQLYGPFGH RSPTRQTLKL
GANAAGQLSA IHHHARIATS SFEDFYEAAA HVTHTLYAAP AISTTYDAVR MDTGTPLFVR
APGIAPGSIA LESAVDEMAE ACGLDPLAFR VKNYAEVEPA TGKPFSSKAL RDCYTQGAER
FGWWERPLKP RTMRDKDGFL VGWGMGTATF HALMFAGQAR AVIRRNGSGV VESGAHDMGQ
GAWTAFAQIA ADALALDLDQ VTFKAGTSDL PDAGIAGGSA HTATVGTAIH NAGAAVITKL
AELATSDQRS PLFGAGNAGV IARNGRLLRR DDEGRGESYA EILARAGLDE VEGSGAGMPD
PAANEHYAMH SHGAVFAEVK VDPDLGQVRV TRMIGAFAAG RIINPKLVRS QLIGGMIWGV
SLALHEEAII DHRSGRIMNA NLGEYHVPVN ADIPAIETFT VNEHDPFVNP LGIKGVGEIG
ITGSAGAVAN AVAHATGIRV RRFPVRISDL VPPVS