| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0860 |
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| Symbol | |
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| ID | 5155294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 884830 |
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| End bp | 888339 |
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| Gene Length | 3510 bp |
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| Protein Length | 1169 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640555857 |
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| Product | putative two-component hybrid sensor histidine kinase and response regulator |
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| Protein accession | YP_001237027 |
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| Protein GI | 148252442 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0827695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCATG ACTGGGGCGT GATCGCCGCT GCGTTCGGCT ATATCGGCTT TCTGTTCCTG
GTCGCCAGCC GTGGCAACCG GGCCGGCGAC CGGCGGCCGT CGCGCTTGGC CGGGCTGATC
TACCCGCTGT CGCTCGCCAT CTATTGCACG TCCTGGACCT TCTTCGGCTC GGTCGGCTTC
GCCTCGCGCA ACAGCGTCGA CTTCCTCGCG ATCTATCTCG GGCCGATCCT GATGGTCGGC
GCCTGCACGC CGCTGCTGCG CCGGGTGATC CAGCTCGCCA AGTCGCAAAA CATCACCTCG
GTGGCCGACC TGATCGGCGC CCGCTACGGC AAGAGCCAGG CCGTGGCGGC GACGGTGGCG
CTGATCGCGA TCATCGGCTC GGTGCCCTAT ATCGCGCTGC AGCTCAAGGC GGTGGCGTCG
TCGCTCGAAA CCATCATGGT CGACGACCGC GCCTTCGCTC ATATCCCGAT CGTCGGCGAC
ATGGCACTGA TGGTGACGCT CGCAATGGCG ATCTTCGCGG TGCTGTTCGG CACCCGCCAG
ACCGACGCCA CCGAGCATCA GCACGGGTTG ATGCTGGCGG TCGCGACCGA ATCGATCATC
AAGCTGATCG CCTTCATCGC GGCAGGCGCC TTCGTCACCT TCTGGATGTT CTCGCCGGTC
GAGCTGATCG AGCGCGCGAT GAAGTCTCCC GAGGCCGAGC GCGCGCTGGA ATATGTGCCG
GGCATCGGCA GCTTCCTGAC CATGACGCTG CTGTCGTTCT GCGCCGCGAT GCTGCTGCCG
CGCCAGTTTC ACGTCAGCGT GGTCGAGAAT GCCGACGACG CCGAGGTGTC GCGGGCGCGC
TGGATGTTCC CGCTATATCT CGTCGCGATC AATTTGTTCG TGATCCCGAT CGCGCTCGCC
GGCCTCATCA CCTTTCCGTT CGGCGCGGTC GACAGCGACA TGTATGTGCT GGCGCTGCCG
ATCGAGGCCA ACTCGCAATG GCTGTCGGTG CTGGTCTTCG TCGGCGGCCT GTCGGCCGCG
ACCGCCATGG TGATTGTCGA ATGCGTCGCG CTGTCGATCA TGGTGTGCAA CGACATCGTC
GTGCCCCTGG TGCTACAGCG CCAGCAGGAG CAGCGCGAGA TCGGGCGCGA CTTCGCAGGC
TTCCTGCTCG GCACAAGGCG GATCGCGATC TTCGCCATCA TGGTGATGGC CTATTTCTAC
TACCGCGCGC TCGGCACGAC CCAACTCGCC GCGATCGGCC TGTTGTCCTT TGCCGCGATC
GCGCAGCTGG CGCCGAGCTT CTTCGGCGGC CTGTTGTGGC GGCGCGCCAC CGCGCGCGGC
GCGATGGGCG GCATGCTGGT CGGCTTCGCC GTCTGGCTGT ACACGCTGTT CATCCCGAGC
TTCCTCGACA CGTCCACGTC GGGCATTCTG TTCTTGCAGC ATGGTCCGTT CGGGCTCGAG
GCGCTCAAGC CGCAGGCGCT GCTCGGCACC GATCTGCCGC CGCTGCTGCA TGGCGTGCTG
TGGAGCCTGT CGCTCAACCT GCTCACCTAC ATCGTGCTGT CGCTGGCCCG GCAGCCGTCG
TCGATCGAGC TGTTGCAAGC CGACCTGTTC GTGCCGGCAG AGCTGACGCC CAGCGCGCCG
AGCTTCCGGC GCTGGCGCTC CACCGTGACC GTGCAGGACA TCCAGACCAC GGTCGGCCAA
TATCTCGGCC CCGACCGCGC CCGCGCCTCG TTCGAGGCGT TTGCCGCCCA GCGCAACCTG
CCGCTCGATC CGGCCGCGCC CGCCGATTTC GAACTGCTGC GCCATGCCGA GCACCTCATC
GCCTCCTCGA TCGGCGCGGC GTCGTCGCGC CTCGTGATGT CGCTCTTGCT GCGCAAGCGC
ACGGTGTCGG CGAAGGCGGC GCTGAAGCTG CTCGACGACT CCCACGCCGC GCTGCATTTC
AACCGGGAGA TCCTGCAGAC CGCGCTCAAC CATGTGCGCC AGGGCATCGC CGTGTTCGAC
GCCGATCTGC AGCTGATCTG CTCCAACGGC CAGTTCGTCG ATCTGCTCGG CCTGCCGCCG
CATCTGGTGC AGATCGGCAG CCCCTTGAGA GAAATCCTCG AATTCATGGG CACGATCGGC
GCGCCGACCT ATGAGGACAG CGAGGCACTG CTGGCACGCC GGCTCGCCGC CTACACCACC
GAGGGCGAGC CCTATCTCGA ACGTCTCGCC GACCGCCACA TGGTGATCGA GGTCCGCACC
AATCGCATGC CGGATGGCGG CCTCGTCATC ACCTTCACCG ATGTGACGCC CTCCTTCGAA
GCCGCCGAGG CACTGGAGCG CGCCAATGCG ACGCTCGAAA AGCGCGTGCG CGACCGCACC
GAGGAGCTGA CGCGGCTGAA CTCCGAGCTC GCGCTGGCCA AGAGCGCCGC CGAGGATGCC
AACATCTCCA AGACCCGCTT TCTCGCGGCG GCCAGCCACG ACATCCTGCA GCCGCTGAAT
GCCGCGCGGC TCTACATCAC AAGCCTGGTC GAGCGGCAGA CCGCTGGCGA GGAGTCGCGC
CTGGTCGAGA ACATCGACGA CTCCCTTGAA GCCATCGAGG AAATCCTGGG CGCGCTGCTC
GACATTTCCC GGCTCGATGC CGGCGCGATG ACGCCACAGG TCTCAAGCTT CAAGATGGCC
GATCTGATGC GCTCGTTGGA GATCGAATTC GCGCCGGCGG CGCGCGCCAA GGGCCTCGCG
CTGACCTTCG TGCCGTGTTC GCTGCCGGTG GAATCAGATC GGCTGCTGCT GCGCCGGCTG
CTGCAGAACC TCATCTCCAA CGCCATCAAA TACACGCCCA AGGGCCGCGT GCTGGTCGGC
TGCCGCCGCC GCGGCGCATC GCTGCAGATC GGCGTCTGGG ACACCGGCGT CGGCATCCCG
CCGGTCAAGC GCGGCGAGAT CTTCAAGGAA TTCCACCGCC TCGAACAGGG CGCGCGCATC
GCCCGCGGCC TCGGCCTCGG CCTTTCGATC GTCGAGCGCA TCGCGCGCGT GCTCAATCAC
GGCATTGCGC TGGACTCGCA GCCCGGCCGC GGCTCGGCCT TCTCGGTGAC GGTGCCGATC
GCCAAGGCGG TCAATCACAC CGCCGCCGTC ACCAGCGCCA CGCCGCTGGC AACGACGCCG
ATCTCCGGCG CGCTGATCGT CTGCATCGAG AACGACCCGG CCATTCTCGA CGGCATGCGC
ACCCTGCTCA CCGCCTGGGA CGCCGAGGTG ATCGCCGTCC CTGATCCGGA ATCCGCCGTC
GAGGCCATCG CCGCCCGCAA CGGCGCCATC ACGGGGCTCC TGGTCGATTA TCACCTCGAT
CGCGGCAACG GCATCGCCGC CATCCGCGAC ATCCGCCGCC GCTTCGACGA GGCGCTGCCG
GCGATCCTGA TCACCGCCGA CCGCAGCCCC CATGTCCGCG CCGCCGCCCG CGACGAAAAC
ATCGCCGTGC TGAACAAGCC GCTGAAGCCT GCGTCGCTGC GCGCGCTGCT CGGGCAATGG
CGGATCCAGC AGATGGTGGC GGCGGAATAG
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| Protein sequence | MLHDWGVIAA AFGYIGFLFL VASRGNRAGD RRPSRLAGLI YPLSLAIYCT SWTFFGSVGF
ASRNSVDFLA IYLGPILMVG ACTPLLRRVI QLAKSQNITS VADLIGARYG KSQAVAATVA
LIAIIGSVPY IALQLKAVAS SLETIMVDDR AFAHIPIVGD MALMVTLAMA IFAVLFGTRQ
TDATEHQHGL MLAVATESII KLIAFIAAGA FVTFWMFSPV ELIERAMKSP EAERALEYVP
GIGSFLTMTL LSFCAAMLLP RQFHVSVVEN ADDAEVSRAR WMFPLYLVAI NLFVIPIALA
GLITFPFGAV DSDMYVLALP IEANSQWLSV LVFVGGLSAA TAMVIVECVA LSIMVCNDIV
VPLVLQRQQE QREIGRDFAG FLLGTRRIAI FAIMVMAYFY YRALGTTQLA AIGLLSFAAI
AQLAPSFFGG LLWRRATARG AMGGMLVGFA VWLYTLFIPS FLDTSTSGIL FLQHGPFGLE
ALKPQALLGT DLPPLLHGVL WSLSLNLLTY IVLSLARQPS SIELLQADLF VPAELTPSAP
SFRRWRSTVT VQDIQTTVGQ YLGPDRARAS FEAFAAQRNL PLDPAAPADF ELLRHAEHLI
ASSIGAASSR LVMSLLLRKR TVSAKAALKL LDDSHAALHF NREILQTALN HVRQGIAVFD
ADLQLICSNG QFVDLLGLPP HLVQIGSPLR EILEFMGTIG APTYEDSEAL LARRLAAYTT
EGEPYLERLA DRHMVIEVRT NRMPDGGLVI TFTDVTPSFE AAEALERANA TLEKRVRDRT
EELTRLNSEL ALAKSAAEDA NISKTRFLAA ASHDILQPLN AARLYITSLV ERQTAGEESR
LVENIDDSLE AIEEILGALL DISRLDAGAM TPQVSSFKMA DLMRSLEIEF APAARAKGLA
LTFVPCSLPV ESDRLLLRRL LQNLISNAIK YTPKGRVLVG CRRRGASLQI GVWDTGVGIP
PVKRGEIFKE FHRLEQGARI ARGLGLGLSI VERIARVLNH GIALDSQPGR GSAFSVTVPI
AKAVNHTAAV TSATPLATTP ISGALIVCIE NDPAILDGMR TLLTAWDAEV IAVPDPESAV
EAIAARNGAI TGLLVDYHLD RGNGIAAIRD IRRRFDEALP AILITADRSP HVRAAARDEN
IAVLNKPLKP ASLRALLGQW RIQQMVAAE
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