| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0857 |
|---|
| Symbol | |
|---|
| ID | 5155662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 881519 |
|---|
| End bp | 883573 |
|---|
| Gene Length | 2055 bp |
|---|
| Protein Length | 684 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640555854 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001237024 |
|---|
| Protein GI | 148252439 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.121274 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGATA TCGGGGAGAG CGGTCGCGGC GGGTCGGCGA CGGTCAGCGT CGATGAGGTT
CGCTATGCAC CCGTGCCGGC GTGGGTCGAC CTTGTCCCCT ACGAGACGGA GCCGTCGCCC
GATCAGGAGT CGGCCATCGC CAATGGCGTT TGCCGGCTGC TCTCCGACAT GCAGGTCGAC
CTCACCGGCC CCGAGCTGTG CTGGAGCTAC CGGACCGCGC AGCGGATCCT GACCAAGGAG
GGCGCCGAGC GGGCGTCCCA CATCGTCATC GAGTTCGATC CCGGCTACCA GAGGCTCGAG
GTCCATGCGG TGCGCATCCG GCGCGGCGAT CAGTCTGTCG ATCATGCACG GCCTGGTTGC
TTCCAGGTCT TTCGCCGCGA GCGGGACATT GAGCGCCTGA TGCTCAACGG GCGTCTCACT
GCCTCTTTCC TGGTGCCGGA CGTCAGGGCG AACGACATCC TGGAGTTCAG CTGCTCACTC
TATGGCGAGA CGCCGATCCT CAAGGGCAAA TACCAATCAT GGGTGGCCTT CGACGGGACC
AATCCGAGCT TCGACTATCG CCATCGGCTG CTGAAGCGGC GTGATCGCGC CATCGCCAGC
AGGGAGTTCA ACGATCCGCC GCCTGCAACG GTGAGCGTGA CCGGCGAGAT CGAGGAGATT
TGTCGACGTC TGCGCGGCCA GAGAAAGCGC GGCCCGAGCG CACCGTTGAC GCCGTCCTGG
GAGATCGAAG ACCCAGCCTT TCAGCTCAGC GAGTTCGTTG GATGGAGCGA TGTCGCGGGC
CTGATGGTGG CGGCCTATGA CAGCGCCGAG ATTCCTGCGA CATTGGCCGA CGAGATCGAC
CGGATCGGTG CGGCCCATCC CGATCCGGCG CAACGCGCGG CCGAGTGGCT GCGCTTCGTG
CAGCGCGAAT TGCGCTATTT CTTTCTCGCA TTGGGAGAGG GCGGCCTGGT GCCGCGCGAG
CTCGATGCGA TCTGGGCCGG TCGGTTCGGC GACTGCAAGG ACAAAGCGCG CCTCTATGTG
GCTGGCGCGC GCCGCCTCGG CCTGGAGGCT TGCGCGGCCC TGGTCTCCAC GACGCATGGC
CGTACGCTCG ACCGGGTGCT GCCGAGCCCG GCCGTGTTCG ATCACTGCAT CGTGCGTGTC
CGGCTCGACG GCAAGAGCTA CTGGCTCGAT CCGACGCTGC CGCTGCAAGG CGGTGGCCTC
GACCAGATCG AGCTGCCCCA TCTCGGATGG GCCTTGCCGC TGGCCGCAGA CGCCTCGCAG
CTGGAAAAGC TGCCCGAGCA AGCCGTCAGG CATATCATCC ATTGCCACGA TGATTGGCGC
ATCGGTCCTT CGCGCCAATC TCCGGCCTCG CTGCATCGCA GCCTCGAGTT TTCGGCCTGG
GGCGCCGACC ACATCAGAAA CCTGATTGCG AATGAGGGCG AGGCCGGCTT CTCGCGAGCC
TTGCTGCGTC AGTTGCAGGC GAGCTGGCCG GCGGCGGCCG AGTCCGCGGC GATCGCGATC
CAGGATGATC AGTTGCAGAA CAAGATCGTC GTGGATGCCC GATATACGAT CAGTGACTGC
TGGCGAGCAT CCGACACGCC GGACAAGATT CAACTGCAGT TCGTCGAATC CAATATCAGC
ACGGACTTGT CGGGCGCCGG CCTGGCCGCC CGCGAGCACG ATATCTATGT TGGACGCCCC
CGACGGCTCT CCTGGCTGCT TCACGTCGAA CTGCCCCGCG CTTGGCCGCG AGCGAAAGCT
GACGAAACCC ATGCCTTGCC CGGGCTGACG CTGACCAGCC GGTACGGCGT GGACGGCCGT
CATGTCGACA GCTTCAAGGA GCTGACCGTC GAGACGTGGA CGTTGCCGCG CGCCAAGGCC
GAGGATTATG ATCTCCTCGT GAAATGTGCG CAGCAGAACA TTCTCTCGAT CCAAGCCTCG
GCCAAGCACG ACAAGGTCCG TGCGCCCGGC TTCCGGTCCA ACCTGAACCT GAATATCTCG
GTGTATGTCG CGTTTCTGGT TCTCTGGTTC GTCTACAACG TGCTCCGGAC CTTGTTGACG
TCCGGCAGGC ATTGA
|
|---|
| Protein sequence | MNDIGESGRG GSATVSVDEV RYAPVPAWVD LVPYETEPSP DQESAIANGV CRLLSDMQVD
LTGPELCWSY RTAQRILTKE GAERASHIVI EFDPGYQRLE VHAVRIRRGD QSVDHARPGC
FQVFRRERDI ERLMLNGRLT ASFLVPDVRA NDILEFSCSL YGETPILKGK YQSWVAFDGT
NPSFDYRHRL LKRRDRAIAS REFNDPPPAT VSVTGEIEEI CRRLRGQRKR GPSAPLTPSW
EIEDPAFQLS EFVGWSDVAG LMVAAYDSAE IPATLADEID RIGAAHPDPA QRAAEWLRFV
QRELRYFFLA LGEGGLVPRE LDAIWAGRFG DCKDKARLYV AGARRLGLEA CAALVSTTHG
RTLDRVLPSP AVFDHCIVRV RLDGKSYWLD PTLPLQGGGL DQIELPHLGW ALPLAADASQ
LEKLPEQAVR HIIHCHDDWR IGPSRQSPAS LHRSLEFSAW GADHIRNLIA NEGEAGFSRA
LLRQLQASWP AAAESAAIAI QDDQLQNKIV VDARYTISDC WRASDTPDKI QLQFVESNIS
TDLSGAGLAA REHDIYVGRP RRLSWLLHVE LPRAWPRAKA DETHALPGLT LTSRYGVDGR
HVDSFKELTV ETWTLPRAKA EDYDLLVKCA QQNILSIQAS AKHDKVRAPG FRSNLNLNIS
VYVAFLVLWF VYNVLRTLLT SGRH
|
|---|
| |