Gene BBta_0853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0853 
Symbol 
ID5154509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp878503 
End bp878814 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content64% 
IMG OID640555850 
ProductPadR family transcriptional regulator 
Protein accessionYP_001237020 
Protein GI148252435 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.293414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.533668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTCC AGCTCAAGAA GGGGGCGCTC GAATTGTGCG TGCTGGCGCT GTTGGCGCGG 
GGCGAGAGCT ATGCCTACGA GATTGCCAGC TCGCTGTCCG CCGGCGTGGG CATCGGCGAG
GGGACGATCT ATCCTTTGAT GCGGCGCATG CAGGACGACA AGCTGGTCGA AACCCGTCTG
GCCGAATCCA ATAGCGGCCC GCCGCGCAAA TATTATCGGC TCACGCCCGC CGGCCGTGCC
GCCTTCGCGG CGCAGAAGCG CGAGTGGCGC ATGTTTTCCG ATGCCGTCAA CACGTTGCTG
GGAGAACGCT GA
 
Protein sequence
MQVQLKKGAL ELCVLALLAR GESYAYEIAS SLSAGVGIGE GTIYPLMRRM QDDKLVETRL 
AESNSGPPRK YYRLTPAGRA AFAAQKREWR MFSDAVNTLL GER