| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0848 |
|---|
| Symbol | |
|---|
| ID | 5154519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 872984 |
|---|
| End bp | 873607 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640555845 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001237015 |
|---|
| Protein GI | 148252430 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3917] 2-hydroxychromene-2-carboxylate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.537333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.685229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCC ACATCGACTA TTATTTCTCG CTGCAATCCC CATGGGCCTA TATCGGTCAT
CGCCTGTTCC GCGACATTGC CGCCAGCCAT GGCGCTGCCG TGGCCGTCAA GCCGGTGATG
CTGCTCGATC TGTTCGCCGA GACCGGCGGC CTGCCGCTGG CGCGGCGTCA TCCGGCGCGG
CAGCGCTACC GTATCGTCGA GCTGAAGCGC TGGCGCGACA AGCGGGGGCT CGATTTTCAT
CTCCAGCCCA GGAACTGGCC GTTCAACGCC CGGCTCGCGG ATGGGGTGGT CATCGCCGCA
ATGCAGGCGG GGCTTGATCC GGAGCCCTAT CTGCAGCGCG CCTTCCCGGC GATCTGGGAG
CAACAGCTCA ATCTCGGGGA CGCCGAGGTG ATCACGCGCT TGGCCGATGC GGCCGGACTG
CCCGGGCGCG ATCTCGTCGC CAAGTCGGGG TCGGACGCGG TCGCGGCGGT CTACGAGCAG
AATCGCCAGG ATGCCATCGC CGCCGATGTG TTCGGCTCGC CCGCTTATGT GCTGGACGGC
GAGATCTTCT GGGGCCAGGA CCGGCTCGAG CTCCTGGCCG ACGCGTTGAA ATCCGGCCGC
TCCGCCTATA CGTCCGAGCC ATAG
|
|---|
| Protein sequence | MPRHIDYYFS LQSPWAYIGH RLFRDIAASH GAAVAVKPVM LLDLFAETGG LPLARRHPAR
QRYRIVELKR WRDKRGLDFH LQPRNWPFNA RLADGVVIAA MQAGLDPEPY LQRAFPAIWE
QQLNLGDAEV ITRLADAAGL PGRDLVAKSG SDAVAAVYEQ NRQDAIAADV FGSPAYVLDG
EIFWGQDRLE LLADALKSGR SAYTSEP
|
|---|
| |