Gene BBta_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0839 
SymbolthrC 
ID5154826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp865807 
End bp867222 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content68% 
IMG OID640555837 
Productthreonine synthase 
Protein accessionYP_001237007 
Protein GI148252422 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCGCT ATGTTTCGAC CCGCGGGGAG GCCCCCGCGC TCACCTTCTG CGATGTGATG 
CTGACCGGGC TCGCCCGGGA CGGCGGCCTC TACGTGCCCG AGACCTGGCC GCAGCTGTCG
GCCGAGACCA TCGCCGGCTT TTTCGGCCGT CCCTATTGGG AGGTTGCGGT CGAGGTCATC
AAACCGTTCG TGGCCGGCGA GATCTCCGAC GCCGAGCTCG GCCGCATGGC CAACGAGGCC
TACGCCACCT TCCGCCACCC GGCCGTGGTG CCGCTCGACC AGATCGCGCC GCATCAGTTC
GTGCTGGAGC TGTTCCACGG CCCGACCCTG GCGTTCAAGG ACGTCGCGAT GCAGCTGATC
TCGCGGCTGA TGGACCATGT GCTGGCCAAG CGCGGCGAGC GCACCACGAT CGTGGTGGCG
ACCTCGGGCG ATACCGGCGG TGCCGCGGTC GATGCCTTCG CCGGTCGCGA CAATGCCGAT
CTCATCGTGC TGTTCCCGCA TGGCCGCATC TCCGAGGTGC AGCGGCGGAT GATGACGACG
TCGGGCGCGG CCAACGTGCA TGCGCTCGCG ATCGAAGGCC ATTTCGACGA CTGCCAGGCG
ATCGTGAAGG GCCTGTTCAA TCATCACGGC TTCCGTGATT CGGTGGCACT GTCCGGCGTC
AACTCGATCA ACTGGGCGCG CGTCGTCGCC CAGGTCGTCT ATTACTTCAC CTCGGCGGTC
GCCGTCGGCG CGCCGCACCG CGCGGTCGAC TTCACCGTGC CGACCGGCAA TTTCGGCGAC
ATTTTCGCCG GCTATGTCGC CAAGCGCATG GGCCTGCCGG TGCGCACCTT GCGCGTTGCG
ACCAACGTCA ACGACATCCT GGCGCGCACG CTTGCGACCG GCATCTACGA GGTCCGCGAG
GTGCATGCGA CGGCGTCGCC CTCGATGGAC ATCCAGGTGT CCTCGAATTT CGAGCGGCTC
CTGTTCGAGG CCGGGGGCCG CGACGCCGGC ACGGTGCGGC GGCTGATGGA GGGCCTGAAG
CAATCCGGCC GCTTCGTGCT GCCCGACGCA ATGCTGGCGG CTGTTCGCGC CGATTTCGAG
GCCGGCCGCG CCGACGAGAC CGAGACGGCG GCCGCGATTC GCGCCGCGTT CCGCGAGGCC
GGCGATCTCG TCGATCCTCA CACGGCGGTC GCGCTGGCCG TGGCCGACCG CGACGGGACC
GACACCTCCG TGCCGAACAT CGTGCTGGCG ACCGCGCATC CGGCCAAATT CCCCGATGCG
GTCGAGGCCG CCTGCGGAAT GCGGCCGCAT CTGCCGGTCT GGCTCGACGG GCTGATGACC
AAGCGCGAGG AGATCAGGAT CATGCGGAAC GACCAGGCCG AGGTAGAGAA ATTCATCCGT
TCGGTCAGCC GGGCCGCCAA GCAGGGAATT GCATGA
 
Protein sequence
MTRYVSTRGE APALTFCDVM LTGLARDGGL YVPETWPQLS AETIAGFFGR PYWEVAVEVI 
KPFVAGEISD AELGRMANEA YATFRHPAVV PLDQIAPHQF VLELFHGPTL AFKDVAMQLI
SRLMDHVLAK RGERTTIVVA TSGDTGGAAV DAFAGRDNAD LIVLFPHGRI SEVQRRMMTT
SGAANVHALA IEGHFDDCQA IVKGLFNHHG FRDSVALSGV NSINWARVVA QVVYYFTSAV
AVGAPHRAVD FTVPTGNFGD IFAGYVAKRM GLPVRTLRVA TNVNDILART LATGIYEVRE
VHATASPSMD IQVSSNFERL LFEAGGRDAG TVRRLMEGLK QSGRFVLPDA MLAAVRADFE
AGRADETETA AAIRAAFREA GDLVDPHTAV ALAVADRDGT DTSVPNIVLA TAHPAKFPDA
VEAACGMRPH LPVWLDGLMT KREEIRIMRN DQAEVEKFIR SVSRAAKQGI A