| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0809 |
|---|
| Symbol | |
|---|
| ID | 5154405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 833149 |
|---|
| End bp | 834231 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640555807 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001236977 |
|---|
| Protein GI | 148252392 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.244326 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTCA GTCGGCACGC GCCTTCAGGC GCCACCCTGT TGCTTGCCCT GTTCACACTG
GCGGCCTGTC AAGAGCCGCC GCCGGCCGCT GAAAAGCCCC GCCCGGTCAG GACGGTCAAG
GCAACGCCCA TCGACGGCGG TGAAGAGATC ACCCAGACCG GCGAGGTTCG TCCCCATGTC
GAGACCGATC TCGGTTTCCG GATCGACGGG CGCGTCACCT CCCGCCAGGT CGAGATCGGA
GCCAGCGTGC AGAAGGGCGA GTTGCTCGCC ACGCTCGACG ATACCAACGT CGCCAACGAG
CTGCGTGCGG CGGAAGCGGA TCTTGCCAGC GCCACGGCAG CGGAAAGCCT GGCGAAGACC
ACGCTGGAAC GACAGCAGAT CCTGCTCGAC AAGCAGATCG TCGCCCAGGT CCGGGTCGAT
GAGGCCGACG CGAATTGGCG CTCGGCCAAG GCGCGCCTCG ACGCGGCCGC CTCCGCGCTC
GCCAATGCCA AGGCGCGGCT GAGCTACACG CGGCTGCTCG CGCCGGAGAC CGGCGTGATC
ACCGCCATCG GCGCCAATGC GGGGCAAGTC GTGCCCGCCG GCCAGATGGT GGTCCGGCTT
GCCTCGTCGC TCGAGCGCGA CGCGGTGTTC AACGTCGCCG AAAGTGTGAT CAACAACGCG
CCGCCCGATA TCGAGGTGAA GGTCACGCTC GTGTCCGATC CATCGGTGGT GTTGAGCGGA
CGCGTGCGCG ACGTGAGCCC GACCGCCGAT CCCTCGACCC GGACCTACCG CGTCCGCGTT
GCCCTCCCCG ACACGCCGCC GCTGTCCTAT GGCGCCGTCG TGACCGGCTC GGTGCGCTAT
CTGGCCGGGC GCAGCATCGC ATTGCCCGCC TCGGCGCTGA CCGCTGAGAA CGGACAACCG
GCGGTCTATG TCGTCGAGCC GCGCAGCAAG ACGCTCAAGC GCAAGCCGGT GACCGTCAGC
CGCTACACGG CTTCGACCAT CTACGTCACC TCCGGGCTTG CGGCCGGCGA CGACATCGTC
ACCGCCGGCG TCAGCAAGCT GCGTCCCGAC CAGATTGTCG CCTTTGATGG AGATGTGAAA
TGA
|
|---|
| Protein sequence | MTFSRHAPSG ATLLLALFTL AACQEPPPAA EKPRPVRTVK ATPIDGGEEI TQTGEVRPHV
ETDLGFRIDG RVTSRQVEIG ASVQKGELLA TLDDTNVANE LRAAEADLAS ATAAESLAKT
TLERQQILLD KQIVAQVRVD EADANWRSAK ARLDAAASAL ANAKARLSYT RLLAPETGVI
TAIGANAGQV VPAGQMVVRL ASSLERDAVF NVAESVINNA PPDIEVKVTL VSDPSVVLSG
RVRDVSPTAD PSTRTYRVRV ALPDTPPLSY GAVVTGSVRY LAGRSIALPA SALTAENGQP
AVYVVEPRSK TLKRKPVTVS RYTASTIYVT SGLAAGDDIV TAGVSKLRPD QIVAFDGDVK
|
|---|
| |