| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0808 |
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| Symbol | |
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| ID | 5154404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 830039 |
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| End bp | 833152 |
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| Gene Length | 3114 bp |
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| Protein Length | 1037 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640555806 |
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| Product | RND family mulitdrug efflux protein |
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| Protein accession | YP_001236976 |
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| Protein GI | 148252391 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.485603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.163102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC CCGACACCCA CTCCGGTCAC GGCTCCGGCT TCAACCTCTC GGCCTGGGCG
CTGCGCCAAT CATCCCTCGT CATCTTCATG ATGATCGTGG TGCTGCTGGC CGGCGCGTGG
AGCTACACTA AGCTGACACG CAACGAGGAC CCGCCCTTCA CGATCAAGAC CATGGTGGTG
TCGGTGATCT GGCCCGGCGC CACCGTCGCG GACACGACCA ACCTCGTCAC CGACCGCATC
GAGCAGAAGC TCGAAGAGAC GCCCTATCTC GATCGGCTCG ACAGCTATAC GCGCGCCGGC
GAGTCCGTGA TCATGGTGAA CCTGCGCGAC GATACGCCTC CGCAGGCCGT CTCGGACGTC
TGGTACCAGG TGCGCAAGAA GGTCGGCGAC ATCGCCCCGA TGCTGCCGTC AGGCGTGCGC
GGCCCGTTCT TCAACGATGA GTTCGGCGAT ACGTTCGGCA TCATCTATGG CTTCACGGCC
GAAGGCTTCT CCGATCGCGA GCTGCGCGAC CGGCTGGACA CGATCCGCGC CGAGGTGCTG
CGCGTCAAGG ATGTCGGCAA GGTCCAGCTG CTCGGCGTGC AGGAAGAGCA GATCGCGGTC
GAATTCTCGC CACGCAAGCT CGCCGCCTTC GGCCTTAATG CGCAGCAGGT GATGAACGCG
CTGGCGGCGC AGAACGCGGT GCAGCCGGCC GGCGTCACCC GCACCGGCGA GGAGAAGATC
GCACTGCGCG TCAGTGGCGC GTTCGCCTCG GAGGCGAGCC TTCGGGCGGT GACCCTGCAC
GTCGCGCAGC GCTACGTGCC GCTGACCGAC ATCGCCACGA TCAGCCGCAT TCCAGTCGAC
CCGCCGGCGG CCGCGTTCCG CGTCAATAGC GAGAAGGCGC TCGGCCTCGC GATCTCGATG
GCGCCGACTG GCAATCTCTC CGAATTCGGC GCGGCGGTCC GCGAGCGCAT GACCGAGATC
GGCGCCCGCC TGCCGCACGG TATCGACATG GTGGCGGTCG CCGATCAGTC GAGCGTCGTG
AAGGATGCGA TCTTCGGCTT CCTCAAGGTG CTGGTCGAGG CGATTGCGAT CGTGCTCGCG
GTGTCGTTCC TGTCGCTCGG CGCGCGCGCC GGCCTGGTCG TGACCTTCTC CATTCCGCTG
GTGCTCGCAA TGACCTTTGT CGGCATGGAG CTCGCCGGCA TCGGGCTGCA GCGCATCTCG
CTCGGCGCCC TGATCATCGC GCTCGGCCTC TTGGTCGACG ACGCCATGAT CACCGTGGAG
GCGATGGTGT CGCGGCTGGA GGCCGGCTGG GATCGCGCCC GCGCAGCGTC CTATGCCTAC
GACTCCACCG CCTTTCCGAT GCTCACGGGG ACGCTCGTGA TGATCGCGGG CTTCATTCCG
GTCGGCTTCG CCGCCTCCAG CGCCGGCGAA TACTGCTTCT CGCTGTTCAT GGTGGTGCTG
ATCTCGCTGT CGGCGTCGTG GATCGTCGCG GTGCTGTTCT CGCCGATCAT CGGCACCTGG
ATCCTGCCGA AGAGCATGGC CGCGCACGGC CATGAAGACG GCCGGATCGG ACGCGCCTAC
AACCGGCTGC TCGAGCTCGT GCTGCGCCGG CCGGCCGCCA CCATCATCGT CTCGCTGACG
GCGCTTGTCG TCTCGGGCCT TGGCGCGATG CGGCTGGAGC AGCAGTTCTT TCCGCCGTCG
GACCGGCCCG AGCTGCTGGT CAGCCTGACA CTGCCGCAGA ACGCCTCGTT CGAGGCAACC
GATGTGCAGG CCAAGCGGCT CGAAGCCATG CTGAAGACGG ATCCGGACAT CGACCGCTTC
TCGACCTATG TGGGCGCCGG CGCCATCCGC TTCTATTTGC CGATGGACGT GCTGCTCAGC
AATGACAACG TGACTCAGAT GGTGGTCGTG GCCAGGGATC TGGATGCCCG CGACCGGGTG
AAGGCCAGGC TCGATGCCGC GTTCCGCACC GAGTTCGCCG ACCTGATCAC CCGCGCCAAC
CCGCTCGAAT TGGGGCCGCC GGTCGGCTGG CCGCTGAAAT ATCGTGTCAC CGGCCCCGAT
GTCGGCAAGG TGCGCGAGAT CGCCATGCAG CTTGCGAACA TCGTGGCCGG CAATGCCGAG
ACACGCGACG TCAATCTGAG CGCCGGCGAG CCGCAGAAGA GCGTCGAGGT CAAGGTCCGC
CAGACCGAAG CGCGCGCCGT CGGCCTGTCG TCGCAGGACG TCGCTGCCGC GCTCGCCACG
ATCTTCTCCG GCAGCCCGGT CACGACGGTC CGCGACGCCA ACCGGCTGGT CGACGTCGTC
GTCCGCTCCG CTGGGCTCGA GCGCAACGAT CTGGCGACCG TGGCCAATCT GCAGATCACC
GGCCCCGACG GCGCGGCGAT CCCGCTGCGC CAGATCGCTG ACGTCGCCTA TGGCGTCGAG
GAGCCGATCA TCTGGCGCCG GCAGCGGCTG CCGATCATCA CCGTGCAGGC CGACGTCGAC
GCAGCCGTCC AGCCCGCCAC CGTCTCGGAG GCGCTTTCGC CTGCCGTGGC CAAGTTCGCG
GCGGGGCTGC CGGACGGCTA TCGCATCGCC GAGGGCGGCG TGGTCGAAGA GGCGGCCAAG
GGCAATGCGT CGATCTTCGC CGTCATCCCC TTGATGCTGC TGGTCATGGT GTCGCTGCTG
ATGGTCCAGC TGCGCAGCTT CTCGCGGACC GGCATTGCGC TGGCCATGGC ACCGTTCGGC
TTGATCGGCG TGGTCGGCGC GATGCTGCCG ACCGGCACCG CGATGGGCTT CGTCGCCCAG
CTCGGGGTCA TCGCGCTTGC CGGCATGATC ATCCGCAACG CCGTGATCCT GATCGAGGAG
GCGGACATCA ATGTCGCAGG CGGCATGGCC ACCGATGACG CCATCAAGGC GGCCGCAAGG
CACCGCGCGC GACCGATCCT GCTGACGGCG CTCGCCGCCA TCCTCGGCAT GATCCCGATC
GCGCCGCAGG TGTTCTGGGG ACCGATGGCC TTTGCGATCA TCGGCGGACT GGCAGCAGCG
ACCTTGCTGA CCCTGACCCT GCTGCCGGTG ATCCTCTCGC TGCTGTTTGC GGCCGAAGCC
CGCCGCCAGG AGGGCGCAGA CCGGGCCGCC GCGCCGTCGG GACAGGCCGT CTGA
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| Protein sequence | MSAPDTHSGH GSGFNLSAWA LRQSSLVIFM MIVVLLAGAW SYTKLTRNED PPFTIKTMVV
SVIWPGATVA DTTNLVTDRI EQKLEETPYL DRLDSYTRAG ESVIMVNLRD DTPPQAVSDV
WYQVRKKVGD IAPMLPSGVR GPFFNDEFGD TFGIIYGFTA EGFSDRELRD RLDTIRAEVL
RVKDVGKVQL LGVQEEQIAV EFSPRKLAAF GLNAQQVMNA LAAQNAVQPA GVTRTGEEKI
ALRVSGAFAS EASLRAVTLH VAQRYVPLTD IATISRIPVD PPAAAFRVNS EKALGLAISM
APTGNLSEFG AAVRERMTEI GARLPHGIDM VAVADQSSVV KDAIFGFLKV LVEAIAIVLA
VSFLSLGARA GLVVTFSIPL VLAMTFVGME LAGIGLQRIS LGALIIALGL LVDDAMITVE
AMVSRLEAGW DRARAASYAY DSTAFPMLTG TLVMIAGFIP VGFAASSAGE YCFSLFMVVL
ISLSASWIVA VLFSPIIGTW ILPKSMAAHG HEDGRIGRAY NRLLELVLRR PAATIIVSLT
ALVVSGLGAM RLEQQFFPPS DRPELLVSLT LPQNASFEAT DVQAKRLEAM LKTDPDIDRF
STYVGAGAIR FYLPMDVLLS NDNVTQMVVV ARDLDARDRV KARLDAAFRT EFADLITRAN
PLELGPPVGW PLKYRVTGPD VGKVREIAMQ LANIVAGNAE TRDVNLSAGE PQKSVEVKVR
QTEARAVGLS SQDVAAALAT IFSGSPVTTV RDANRLVDVV VRSAGLERND LATVANLQIT
GPDGAAIPLR QIADVAYGVE EPIIWRRQRL PIITVQADVD AAVQPATVSE ALSPAVAKFA
AGLPDGYRIA EGGVVEEAAK GNASIFAVIP LMLLVMVSLL MVQLRSFSRT GIALAMAPFG
LIGVVGAMLP TGTAMGFVAQ LGVIALAGMI IRNAVILIEE ADINVAGGMA TDDAIKAAAR
HRARPILLTA LAAILGMIPI APQVFWGPMA FAIIGGLAAA TLLTLTLLPV ILSLLFAAEA
RRQEGADRAA APSGQAV
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