Gene BBta_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0802 
Symbol 
ID5153421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp822504 
End bp825359 
Gene Length2856 bp 
Protein Length951 aa 
Translation table11 
GC content69% 
IMG OID640555800 
Productputative ATP dependent DNA helicase 
Protein accessionYP_001236970 
Protein GI148252385 
COG category[R] General function prediction only 
COG ID[COG1201] Lhr-like helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0602568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCCGT GCGTTCGCAG GGACGACGGC GGAAATCGGG GAGGCGCTGG TCCGCCCCAG 
CAAGGGCCGG ATGCCAGCGG TGTTTCCCGC GGCGGCTCGG CTGCCTCGGG CCTCGACGAA
CCGCGGGCGA CTGCCTACCT TCCCCCGGTG CCGCCCCGCA TCTCACCAGT CCCGCCTGAC
GACAGCGCCG CGCTGCCGGA CCATTTCAAT AGATGGTTCG CGGCGCGCGG CTGGGCGCCG
CGTGCGCATC AGCTGGCGCT GCTGGACAAG GCGCGCGCGC AGCGCTCGGC GCTGCTGATC
GCCCCCACCG GTGCCGGCAA GACGCTGGCC GGGTTCCTGC CGACCCTGGT GGAGCTCGGC
TCCGCGGTTG CGACACCGCA CCGATCGGCT CTCGCCAAGC AAGCCGCTCT CTCCACTCCT
TTCCCCCTCG TGGGGGAGGG GCGAGGAGGG GGGCCGCCGG CGGCGGCGCC AATGGTGGAA
TCCGCTCCGC AACAGCCCGC TTCTCAGCAA TCGGCAACTG CCGACACCGC AGCGAAGCAG
CCCGCCAGAT CCATCGCCCG CCCCGCCGGC CTGCACACCC TCTACATCTC GCCCTTGAAG
GCGCTCGCCG TCGACATCGC GCGCAATCTC CAGGCGCCGA TCTCCGAGAT GGGCCTGCCG
ATCAAGGTCG AGACCCGGAC CGGCGATACG CCGGCGTCAC GCAAGCAGCG GCAGCGACGC
TATCCGCCCG ACATCCTGCT GACGACACCC GAGCAGCTGG CGCTGTTGTT GTCGTCGGAC
GACGCGCCGC ATCTGTTTTC CTCGCTCCAG CGCGTGGTGC TGGACGAGCT GCATGCGCTG
GTCACCTCCA AGCGCGGCGA TCTGTTGTCC CTCGGGCTGG CGCGGCTGTG GCGCCTCGCG
CCCGGTCTGC GCATGATCGG CCTGTCGGCG ACCGTCGCGC AGCCGGAGCA GCTCGCGCGC
TTTCTGGTGC CGCAGCCGAA TGGCAGCAGC GTCGCCGCCG ACGTCGTCGT CGCCGGGGGC
GCTGCGCCGC CGCTGGTCGA GATGCTGGAC ACGCAGGAGC GCCTGCCCTG GGCCGGCCAT
AGTGCCCGGC ACGCGCTGGC CGAGATGTAC GAGCTCATCA AGACGAACAA GACCACGCTC
GTCTTCGTCA ACACCCGCAG CCAGGCCGAG ATGCTGTTCC AGGAGTTCTG GCGGATCAAC
GACGACAATC TCGCCATTGC CCTGCATCAT GGCTCGCTCG ACGTTGCGCA ACGCCGCAAG
GTCGAGGATG CGATGGCGGC CGGCAGGCTC CGCGGCGTGG TCTGCACATC CTCGCTCGAC
CTCGGCGTCG ATTGGGGCGA CGTCGACCTC GTCATCAATG TCGGCGCGCC CAAGGGCTGC
TCGCGGCTGA TGCAGCGCAT CGGCCGCGCC AATCACCGGC TCGACGAAGC CTCGCGCGCG
GTGCTCGTGC CGGCCAACCG CTTCGAGGTG CTGGAATGCT CGGTCGCGAT CGAGGCCATC
GCCGACAATG CGCAGGATAC GCCGCCGCTG CGCACCGGCG CGCTCGACGT GCTGGCCCAG
CACGTGCTCG GCTGCGCCTG CGGCGAGCCG TTTGCCAGCG ATGAGCTTTA TGCCGAGGTG
ATCACGGCCG CGCCCTATGC ACAGCTGTCG CGTGCCGATT TCGACGATGT CGTCGACTTC
GTCGCGTCCG GCGGCTACGC GCTGAAGACC TATGAGCGCT TCGCGCGCAT CAAGCAGGAC
GCCAAGGGAC GCTGGCGCGT CGCCAATCCC AAGGTGCGGC AGAGCTATCG CTTGAACGTC
GGCACCATCG TCGAGGAGGC GATGCTGAAG GTGCGGCTGG TGCGCTCGCG CGGCGGGGCC
AAAGGGACGA CCGGCGCGAT CGCGCGCGGC GGCCGGCTGC TCGGCGAGAT CGAGGAATAC
TTCATCGAGG GTCTCACACC GGGCGACACC TTCGTGTTCG GCGGCGAGAT CGTGCGCTAC
GAGGCGCTGG CCGAGGATCA GGTCTACGTG TCGCGCGCCA ACGACGCCGA TCCGAAAGTG
CCATCCTACA TGGGCGGCAA GTTCCCGCTG TCGACCTATC TCGCCGAGCG CGTCCGCGGC
CTGCTCGACG ATCGCAAGGC GTGGATGCAA TTGCCGGAGC AGGTGCGCGA CTGGCTCGCG
CTGCAGACCG ATGTCTCGCG GATCCCTGCC CGGCGCGAGC TGCTGGTCGA GACCTTTCCT
CGCTCCAACA AGCATTACCT CGTCTGCTAT CCGTTCGAAG GCCGGCTCGC GCATCAGACG
CTCGGCATGC TGCTGACGCG CCGCTTGGAG CGCGCGCGCG CCCGGCCGCT TGGCTTCGTC
GCCAATGAAT ATGCGCTGGC GGTGTGGGGG CTCGGCGACA TGTCGCTGAT GGTGAGCCAA
GGCCGGCTGG ATCTCGCCGC GCTGTTCGAT CCGGACATGC TGGGCGACGA TCTCGAAGCG
TGGCTCGCTG AATCCGCGCT GATGAAGCGC ACCTTCCGCT CCTGCGCCAT CATTTCCGGA
CTGATTCCGC GCCGTTTCAC CGGCGAGGAG AAGACGCGCC GCCAAGTGCT GTTCTCGACC
GATCTCGTCT ACGACGTGCT GCGCCGGCAC CAGCCCGATC ACATGCTGTT GCGCGCCGCG
CGCGCCGATG CCGCCACCGG CCTGCTCGAT CTGCGCCGCC TGGGTGATAT GCTTAAGCGC
ATCGAGGGCC GAATCACCCA TCGTCCGCTC GATCGCGTCT CGCCTCTGGC GGTGCCGGTG
ATGCTGGAAA TCGGCCGCGA ATCCGTCTAT GGCGAGGCCG CCGACGAACT CCTGGCCGAG
GCCGCCGAGG AACTCGTCAA GGAGGCGATG GGGTAG
 
Protein sequence
MGPCVRRDDG GNRGGAGPPQ QGPDASGVSR GGSAASGLDE PRATAYLPPV PPRISPVPPD 
DSAALPDHFN RWFAARGWAP RAHQLALLDK ARAQRSALLI APTGAGKTLA GFLPTLVELG
SAVATPHRSA LAKQAALSTP FPLVGEGRGG GPPAAAPMVE SAPQQPASQQ SATADTAAKQ
PARSIARPAG LHTLYISPLK ALAVDIARNL QAPISEMGLP IKVETRTGDT PASRKQRQRR
YPPDILLTTP EQLALLLSSD DAPHLFSSLQ RVVLDELHAL VTSKRGDLLS LGLARLWRLA
PGLRMIGLSA TVAQPEQLAR FLVPQPNGSS VAADVVVAGG AAPPLVEMLD TQERLPWAGH
SARHALAEMY ELIKTNKTTL VFVNTRSQAE MLFQEFWRIN DDNLAIALHH GSLDVAQRRK
VEDAMAAGRL RGVVCTSSLD LGVDWGDVDL VINVGAPKGC SRLMQRIGRA NHRLDEASRA
VLVPANRFEV LECSVAIEAI ADNAQDTPPL RTGALDVLAQ HVLGCACGEP FASDELYAEV
ITAAPYAQLS RADFDDVVDF VASGGYALKT YERFARIKQD AKGRWRVANP KVRQSYRLNV
GTIVEEAMLK VRLVRSRGGA KGTTGAIARG GRLLGEIEEY FIEGLTPGDT FVFGGEIVRY
EALAEDQVYV SRANDADPKV PSYMGGKFPL STYLAERVRG LLDDRKAWMQ LPEQVRDWLA
LQTDVSRIPA RRELLVETFP RSNKHYLVCY PFEGRLAHQT LGMLLTRRLE RARARPLGFV
ANEYALAVWG LGDMSLMVSQ GRLDLAALFD PDMLGDDLEA WLAESALMKR TFRSCAIISG
LIPRRFTGEE KTRRQVLFST DLVYDVLRRH QPDHMLLRAA RADAATGLLD LRRLGDMLKR
IEGRITHRPL DRVSPLAVPV MLEIGRESVY GEAADELLAE AAEELVKEAM G