Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0802 |
Symbol | |
ID | 5153421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 822504 |
End bp | 825359 |
Gene Length | 2856 bp |
Protein Length | 951 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640555800 |
Product | putative ATP dependent DNA helicase |
Protein accession | YP_001236970 |
Protein GI | 148252385 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0602568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCCGT GCGTTCGCAG GGACGACGGC GGAAATCGGG GAGGCGCTGG TCCGCCCCAG CAAGGGCCGG ATGCCAGCGG TGTTTCCCGC GGCGGCTCGG CTGCCTCGGG CCTCGACGAA CCGCGGGCGA CTGCCTACCT TCCCCCGGTG CCGCCCCGCA TCTCACCAGT CCCGCCTGAC GACAGCGCCG CGCTGCCGGA CCATTTCAAT AGATGGTTCG CGGCGCGCGG CTGGGCGCCG CGTGCGCATC AGCTGGCGCT GCTGGACAAG GCGCGCGCGC AGCGCTCGGC GCTGCTGATC GCCCCCACCG GTGCCGGCAA GACGCTGGCC GGGTTCCTGC CGACCCTGGT GGAGCTCGGC TCCGCGGTTG CGACACCGCA CCGATCGGCT CTCGCCAAGC AAGCCGCTCT CTCCACTCCT TTCCCCCTCG TGGGGGAGGG GCGAGGAGGG GGGCCGCCGG CGGCGGCGCC AATGGTGGAA TCCGCTCCGC AACAGCCCGC TTCTCAGCAA TCGGCAACTG CCGACACCGC AGCGAAGCAG CCCGCCAGAT CCATCGCCCG CCCCGCCGGC CTGCACACCC TCTACATCTC GCCCTTGAAG GCGCTCGCCG TCGACATCGC GCGCAATCTC CAGGCGCCGA TCTCCGAGAT GGGCCTGCCG ATCAAGGTCG AGACCCGGAC CGGCGATACG CCGGCGTCAC GCAAGCAGCG GCAGCGACGC TATCCGCCCG ACATCCTGCT GACGACACCC GAGCAGCTGG CGCTGTTGTT GTCGTCGGAC GACGCGCCGC ATCTGTTTTC CTCGCTCCAG CGCGTGGTGC TGGACGAGCT GCATGCGCTG GTCACCTCCA AGCGCGGCGA TCTGTTGTCC CTCGGGCTGG CGCGGCTGTG GCGCCTCGCG CCCGGTCTGC GCATGATCGG CCTGTCGGCG ACCGTCGCGC AGCCGGAGCA GCTCGCGCGC TTTCTGGTGC CGCAGCCGAA TGGCAGCAGC GTCGCCGCCG ACGTCGTCGT CGCCGGGGGC GCTGCGCCGC CGCTGGTCGA GATGCTGGAC ACGCAGGAGC GCCTGCCCTG GGCCGGCCAT AGTGCCCGGC ACGCGCTGGC CGAGATGTAC GAGCTCATCA AGACGAACAA GACCACGCTC GTCTTCGTCA ACACCCGCAG CCAGGCCGAG ATGCTGTTCC AGGAGTTCTG GCGGATCAAC GACGACAATC TCGCCATTGC CCTGCATCAT GGCTCGCTCG ACGTTGCGCA ACGCCGCAAG GTCGAGGATG CGATGGCGGC CGGCAGGCTC CGCGGCGTGG TCTGCACATC CTCGCTCGAC CTCGGCGTCG ATTGGGGCGA CGTCGACCTC GTCATCAATG TCGGCGCGCC CAAGGGCTGC TCGCGGCTGA TGCAGCGCAT CGGCCGCGCC AATCACCGGC TCGACGAAGC CTCGCGCGCG GTGCTCGTGC CGGCCAACCG CTTCGAGGTG CTGGAATGCT CGGTCGCGAT CGAGGCCATC GCCGACAATG CGCAGGATAC GCCGCCGCTG CGCACCGGCG CGCTCGACGT GCTGGCCCAG CACGTGCTCG GCTGCGCCTG CGGCGAGCCG TTTGCCAGCG ATGAGCTTTA TGCCGAGGTG ATCACGGCCG CGCCCTATGC ACAGCTGTCG CGTGCCGATT TCGACGATGT CGTCGACTTC GTCGCGTCCG GCGGCTACGC GCTGAAGACC TATGAGCGCT TCGCGCGCAT CAAGCAGGAC GCCAAGGGAC GCTGGCGCGT CGCCAATCCC AAGGTGCGGC AGAGCTATCG CTTGAACGTC GGCACCATCG TCGAGGAGGC GATGCTGAAG GTGCGGCTGG TGCGCTCGCG CGGCGGGGCC AAAGGGACGA CCGGCGCGAT CGCGCGCGGC GGCCGGCTGC TCGGCGAGAT CGAGGAATAC TTCATCGAGG GTCTCACACC GGGCGACACC TTCGTGTTCG GCGGCGAGAT CGTGCGCTAC GAGGCGCTGG CCGAGGATCA GGTCTACGTG TCGCGCGCCA ACGACGCCGA TCCGAAAGTG CCATCCTACA TGGGCGGCAA GTTCCCGCTG TCGACCTATC TCGCCGAGCG CGTCCGCGGC CTGCTCGACG ATCGCAAGGC GTGGATGCAA TTGCCGGAGC AGGTGCGCGA CTGGCTCGCG CTGCAGACCG ATGTCTCGCG GATCCCTGCC CGGCGCGAGC TGCTGGTCGA GACCTTTCCT CGCTCCAACA AGCATTACCT CGTCTGCTAT CCGTTCGAAG GCCGGCTCGC GCATCAGACG CTCGGCATGC TGCTGACGCG CCGCTTGGAG CGCGCGCGCG CCCGGCCGCT TGGCTTCGTC GCCAATGAAT ATGCGCTGGC GGTGTGGGGG CTCGGCGACA TGTCGCTGAT GGTGAGCCAA GGCCGGCTGG ATCTCGCCGC GCTGTTCGAT CCGGACATGC TGGGCGACGA TCTCGAAGCG TGGCTCGCTG AATCCGCGCT GATGAAGCGC ACCTTCCGCT CCTGCGCCAT CATTTCCGGA CTGATTCCGC GCCGTTTCAC CGGCGAGGAG AAGACGCGCC GCCAAGTGCT GTTCTCGACC GATCTCGTCT ACGACGTGCT GCGCCGGCAC CAGCCCGATC ACATGCTGTT GCGCGCCGCG CGCGCCGATG CCGCCACCGG CCTGCTCGAT CTGCGCCGCC TGGGTGATAT GCTTAAGCGC ATCGAGGGCC GAATCACCCA TCGTCCGCTC GATCGCGTCT CGCCTCTGGC GGTGCCGGTG ATGCTGGAAA TCGGCCGCGA ATCCGTCTAT GGCGAGGCCG CCGACGAACT CCTGGCCGAG GCCGCCGAGG AACTCGTCAA GGAGGCGATG GGGTAG
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Protein sequence | MGPCVRRDDG GNRGGAGPPQ QGPDASGVSR GGSAASGLDE PRATAYLPPV PPRISPVPPD DSAALPDHFN RWFAARGWAP RAHQLALLDK ARAQRSALLI APTGAGKTLA GFLPTLVELG SAVATPHRSA LAKQAALSTP FPLVGEGRGG GPPAAAPMVE SAPQQPASQQ SATADTAAKQ PARSIARPAG LHTLYISPLK ALAVDIARNL QAPISEMGLP IKVETRTGDT PASRKQRQRR YPPDILLTTP EQLALLLSSD DAPHLFSSLQ RVVLDELHAL VTSKRGDLLS LGLARLWRLA PGLRMIGLSA TVAQPEQLAR FLVPQPNGSS VAADVVVAGG AAPPLVEMLD TQERLPWAGH SARHALAEMY ELIKTNKTTL VFVNTRSQAE MLFQEFWRIN DDNLAIALHH GSLDVAQRRK VEDAMAAGRL RGVVCTSSLD LGVDWGDVDL VINVGAPKGC SRLMQRIGRA NHRLDEASRA VLVPANRFEV LECSVAIEAI ADNAQDTPPL RTGALDVLAQ HVLGCACGEP FASDELYAEV ITAAPYAQLS RADFDDVVDF VASGGYALKT YERFARIKQD AKGRWRVANP KVRQSYRLNV GTIVEEAMLK VRLVRSRGGA KGTTGAIARG GRLLGEIEEY FIEGLTPGDT FVFGGEIVRY EALAEDQVYV SRANDADPKV PSYMGGKFPL STYLAERVRG LLDDRKAWMQ LPEQVRDWLA LQTDVSRIPA RRELLVETFP RSNKHYLVCY PFEGRLAHQT LGMLLTRRLE RARARPLGFV ANEYALAVWG LGDMSLMVSQ GRLDLAALFD PDMLGDDLEA WLAESALMKR TFRSCAIISG LIPRRFTGEE KTRRQVLFST DLVYDVLRRH QPDHMLLRAA RADAATGLLD LRRLGDMLKR IEGRITHRPL DRVSPLAVPV MLEIGRESVY GEAADELLAE AAEELVKEAM G
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