| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0789 |
|---|
| Symbol | |
|---|
| ID | 5153780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 808476 |
|---|
| End bp | 809585 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640555787 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_001236957 |
|---|
| Protein GI | 148252372 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.00176196 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGCCA AGCAGGAGGG CGTGAACCGG CGGAAGCTGT GCCGTCAGTT CGGCATCAGC
GCCGAGACCG GCTACAAGTG GATCCAGCGG TATGACGCCG GCGATACGAC GCTGGCGGAC
CGGTCGCGGC GGCCGCATCG GAGCCCGGAG CGCACGGCGG CTGCGACTGA GCAGCAGATC
GTCGCGTTGC GCGACGCTCA CCCGACCTGG GGCGCGCGCA AGCTCGCACG TCGTCTCGCG
CGCGACGGGC AAACTGTCCC GGCGATATCC ACCGTGCACA CCATCCTGCG CCGCTACGAT
CGCGTGAGCG AGCCTGCAGG CACGCCGGGG CAGCCGTACA GGCGCTTCGA GAAGGATGCG
CCCAATCAGC TGTGGCAGAT GGACTTCAAG GGGCACAGTG CGCTGGAGAA CGGCGTGTCC
TGTCACCCGC TGACTGCGCT GGACGACCAC TCGCGCTTCT CCGTGTGCCT GGCGGCGTGT
GACAACGAGC GCGGCTCTAC GGTCAAAGGA CATCTGGAGA CGACGTTCCG CCGCTATGGA
CTGCCGGATG CGATGTTCGT CGATAATGGT GGTCCCTGGG GCTTTACTCT CGAAGACCCC
TGGACCGCGC TGACGGTCTG GCTTCTGAAG CTCGGCATTC GAACGATCCA CAGCCGGCCG
TATCATCCTC AGGGCCGCGG CAAGAACGAA CGCTTCCACC GCAGCCTGAA GGCCGAAGTC
TTTGCCTTCA AGCGCTACAG GGACCTTGAC GACGTCCAGC GGGCGCTCGA CGAATGGCGG
GCCGTCTACA ATCTCGACCG GCCCCACGAG GCTCTCGACT TCGATGTGCC GGCGAGCCGC
TACCGGCCGA GCCCGCGAAC GATGCCGGAT CGCCTTCCGA CGGTGGAATA CGACGAGGGT
GAGATCGTCC GTTCGGTGTC GAGCACCAAG GCCTATGTCA GTTTCGAGGG ACGGCTCTGG
AAAGTCCCGC AAGCCTTTCG CAGCGAGCGG CTCGCTATTC GCCCGCTCAG TCAGGACGGA
AAATTCGGAA TTTTCTTTGC CGCGCATCAG ATCGCAGCGA TCGATTTGCG CGACCCCAAA
AGTGTCAACT ATGTCCCCGA ACAGGTGTAA
|
|---|
| Protein sequence | MLAKQEGVNR RKLCRQFGIS AETGYKWIQR YDAGDTTLAD RSRRPHRSPE RTAAATEQQI
VALRDAHPTW GARKLARRLA RDGQTVPAIS TVHTILRRYD RVSEPAGTPG QPYRRFEKDA
PNQLWQMDFK GHSALENGVS CHPLTALDDH SRFSVCLAAC DNERGSTVKG HLETTFRRYG
LPDAMFVDNG GPWGFTLEDP WTALTVWLLK LGIRTIHSRP YHPQGRGKNE RFHRSLKAEV
FAFKRYRDLD DVQRALDEWR AVYNLDRPHE ALDFDVPASR YRPSPRTMPD RLPTVEYDEG
EIVRSVSSTK AYVSFEGRLW KVPQAFRSER LAIRPLSQDG KFGIFFAAHQ IAAIDLRDPK
SVNYVPEQV
|
|---|
| |